RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 NCK1P16333 377 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 RHCEP18577 417 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 CCNA2P20248 432 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 FPR1P21462 350 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 OR1E2P47887 323 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 SORDQ00796 357 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 TFF3Q07654 80 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 RASGEF1BQ0VAM2 473 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 PGM2L1Q6PCE3 622 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 DEF8Q6ZN54 512 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 GDF7Q7Z4P5 450 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 VTCN1Q7Z7D3 282 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 STK32CQ86UX6 486 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 GCNT2Q8N0V5 402 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 FAM156AQ8NDB6 213 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 STARD4Q96DR4 205 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 THTPAQ9BU02 230 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 PTDSS2Q9BVG9 487 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 AMBRA1Q9C0C7 1298 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 MAGIXQ9H6Y5 334 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 SLC7A7Q9UM01 511 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 FAM32AQ9Y421 112 aaKnown RBP14.89□□□□□ -0.03
RNF40-206ENST00000564260 ARHGAP21Q5T5U3 1957 aa14.89□□□□□ -0.03
RNF40-206ENST00000564260 LYPD3O95274 346 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 AGTR1P30556 359 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 SMIM11AP58511 58 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 OR7A5Q15622 319 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 PPP4R4Q6NUP7 873 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 KIF18BQ86Y91 864 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 RNF113BQ8IZP6 322 aaKnown RBP14.88□□□□□ -0.03
RNF40-206ENST00000564260 ACBD4Q8NC06 268 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 RELL2Q8NC24 303 aaPredicted RBP14.88□□□□□ -0.03
RNF40-206ENST00000564260 ABHD3Q8WU67 409 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 ROBO4Q8WZ75 1007 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 RNASE6Q93091 150 aaKnown RBP14.88□□□□□ -0.03
RNF40-206ENST00000564260 ZNF347Q96SE7 839 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 FNDC11Q9BVV2 318 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 FKRPQ9H9S5 495 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 PARPBPQ9NWS1 579 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 ELOVL5Q9NYP7 299 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 A4GNTQ9UNA3 340 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 PROCRQ9UNN8 238 aa14.88□□□□□ -0.03
RNF40-206ENST00000564260 BAHCC1Q9P281 2608 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 A0A1W2PRQ8 180 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 AQP12BA6NM10 295 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 ZNF716A6NP11 495 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 A8MXE2 369 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 EBAG9O00559 213 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 CGAP01215 116 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 THY1P04216 161 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 SEMG1P04279 462 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 FOXF2Q12947 444 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 PIN1Q13526 163 aaPredicted RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 DGCR6Q14129 220 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 GK3PQ14409 553 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 SLC17A1Q14916 467 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 TRAM2Q15035 370 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 OTUD3Q5T2D3 398 aaPredicted RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 BEND4Q6ZU67 534 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 PIWIL3Q7Z3Z3 882 aaKnown RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 GALNT5Q7Z7M9 940 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 LIX1LQ8IVB5 337 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 AQP12AQ8IXF9 295 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 CNEP1R1Q8N9A8 125 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 RNF217Q8TC41 542 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 TMEM239Q8WW34 195 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 LIPHQ8WWY8 451 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 TMEM45BQ96B21 275 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 KTI12Q96EK9 354 aaPredicted RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 C7orf34Q96L11 122 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 ZNF300Q96RE9 604 aaPredicted RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 SPOCK3Q9BQ16 436 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 USB1Q9BQ65 265 aaKnown RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 PRSS27Q9BQR3 290 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 PRR14Q9BWN1 585 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 ASPNQ9BXN1 380 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 LRMDAQ9H2I8 198 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 IL1RAPQ9NPH3 570 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 MRPL39Q9NYK5 338 aaKnown RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 PLEKHB1Q9UF11 243 aaPredicted RBP14.87□□□□□ -0.03
RNF40-206ENST00000564260 ZNF229Q9UJW7 825 aa14.87□□□□□ -0.03
RNF40-206ENST00000564260 SPTAN1Q13813 2472 aaKnown RBP14.86□□□□□ -0.03
RNF40-206ENST00000564260 OR6C65A6NJZ3 312 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 PRSS44E7EML9 344 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 GSC2O15499 205 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 PRSS23O95084 383 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 CLDN1O95832 211 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 MT-ND1P03886 318 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 UMPSP11172 480 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 IGFBP2P18065 325 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 TNFRSF1BP20333 461 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 RPS5P46782 204 aaKnown RBP14.86□□□□□ -0.03
RNF40-206ENST00000564260 ANKDD1AQ495B1 522 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 H1FNTQ75WM6 255 aaPredicted RBP14.86□□□□□ -0.03
RNF40-206ENST00000564260 PIK3C3Q8NEB9 887 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 TAAR8Q969N4 342 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 LRGUKQ96M69 825 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 OR10A4Q9H209 315 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 NDUFAF4Q9P032 175 aa14.86□□□□□ -0.03
RNF40-206ENST00000564260 ING1Q9UK53 422 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms