RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ANKS4BQ8N8V4 417 aa16.25■□□□□ 0.19
NME3-204ENST00000563498 OR1K1Q8NGR3 316 aa16.25■□□□□ 0.19
NME3-204ENST00000563498 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.193e-6■■■■□ 24.4
NME3-204ENST00000563498 AURKBQ96GD4 344 aaPredicted RBP16.25■□□□□ 0.19
NME3-204ENST00000563498 ADAM19Q9H013 955 aa16.25■□□□□ 0.19
NME3-204ENST00000563498 SLC38A1Q9H2H9 487 aa16.25■□□□□ 0.19
NME3-204ENST00000563498 CRNNQ9UBG3 495 aaPredicted RBP16.25■□□□□ 0.19
NME3-204ENST00000563498 ARPC4-TTLL3A0A0A6YYG9 625 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 CFAP73A6NFT4 308 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 OR6C65A6NJZ3 312 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 SPAG7O75391 227 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 BPGMP07738 259 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 OR4A8P0C604 315 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 GIFP27352 417 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 CHI3L1P36222 383 aaPredicted RBP16.24■□□□□ 0.19
NME3-204ENST00000563498 IDH3GP51553 393 aaPredicted RBP16.24■□□□□ 0.19
NME3-204ENST00000563498 EPS8Q12929 822 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 CEACAM7Q14002 265 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 ADIPOQQ15848 244 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 LRRC74BQ6ZQY2 392 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 FAM169BQ8N8A8 192 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 MAGEE2Q8TD90 523 aaPredicted RBP16.24■□□□□ 0.19
NME3-204ENST00000563498 WDR60Q8WVS4 1066 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 HPS1Q92902 700 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 SLC35A5Q9BS91 424 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 RAB1BQ9H0U4 201 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 AKTIPQ9H8T0 292 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 MTHFD2LQ9H903 347 aaPredicted RBP16.24■□□□□ 0.19
NME3-204ENST00000563498 LGALS13Q9UHV8 139 aa16.24■□□□□ 0.19
NME3-204ENST00000563498 ZNF587BE7ETH6 402 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 KRT33AO76009 404 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 AKR7A3O95154 331 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 VAMP5O95183 116 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 RPS4Y1P22090 263 aaKnown RBP16.23■□□□□ 0.19
NME3-204ENST00000563498 UBE2NP61088 152 aaKnown RBP16.23■□□□□ 0.19
NME3-204ENST00000563498 NAAAQ02083 359 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 OR7A5Q15622 319 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 ZSWIM7Q19AV6 140 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 ANKRD16Q6P6B7 361 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 GPAT4Q86UL3 456 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 ZNF440Q8IYI8 595 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 ANKFN1Q8N957 763 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 OR4F15Q8NGB8 312 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 BCL2L2Q92843 193 aaPredicted RBP16.23■□□□□ 0.19
NME3-204ENST00000563498 CCDC115Q96NT0 180 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 SOX7Q9BT81 388 aa16.23■□□□□ 0.19
NME3-204ENST00000563498 TCF21O43680 179 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 STAMBPO95630 424 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 LGI1O95970 557 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 IGLV1-44P01699 117 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 DBIP07108 87 aaKnown RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 CHRM4P08173 479 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 TACSTD2P09758 323 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 HOXB1P14653 301 aaPredicted RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 IL7RP16871 459 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 CXCR1P25024 350 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 ANXA11P50995 505 aaKnown RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 CHN2P52757 468 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 CLNS1AP54105 237 aaKnown RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 PDCD2Q16342 344 aaPredicted RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 SYPL1Q16563 259 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 SPANXN4Q5MJ08 99 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 MRPL2Q5T653 305 aaKnown RBP16.22■□□□□ 0.19
NME3-204ENST00000563498 TMEM225Q6GV28 225 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 RNF130Q86XS8 419 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 LRRC34Q8IZ02 419 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 NUP37Q8NFH4 326 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 ZNF442Q9H7R0 627 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 BTNL2Q9UIR0 455 aa16.22■□□□□ 0.19
NME3-204ENST00000563498 ERCC1P07992 297 aaPredicted RBP16.21■□□□□ 0.19
NME3-204ENST00000563498 CECR9P0C854 216 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 ETV4P43268 484 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 P2RY4P51582 365 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 SH3BGRP55822 239 aaPredicted RBP16.21■□□□□ 0.19
NME3-204ENST00000563498 CREB3L2Q70SY1 520 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 TRIML2Q8N7C3 387 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 ANKK1Q8NFD2 765 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 NEU4Q8WWR8 484 aaPredicted RBP16.21■□□□□ 0.19
NME3-204ENST00000563498 ALKBH3Q96Q83 286 aaPredicted RBP16.21■□□□□ 0.19
NME3-204ENST00000563498 TAPBPLQ9BX59 468 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 LINC00470Q9BZP3 86 aa16.21■□□□□ 0.19
NME3-204ENST00000563498 LRP5LA4QPB2 252 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 A8MVM7 634 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 VSTM5A8MXK1 200 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 E9PBE3 544 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 SNUPNO95149 360 aaKnown RBP16.2■□□□□ 0.18
NME3-204ENST00000563498 IGKV3-15P01624 115 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 C1QCP02747 245 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 MYZAPP0CAP1 466 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 DAOP14920 347 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 S100A3P33764 101 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 SELENOPP49908 381 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 FAM174BQ3ZCQ3 159 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 VHLLQ6RSH7 139 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 UGT2A3Q6UWM9 527 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 LSRQ86X29 649 aaPredicted RBP16.2■□□□□ 0.18
NME3-204ENST00000563498 MEX3DQ86XN8 651 aaKnown RBP16.2■□□□□ 0.18
NME3-204ENST00000563498 NUDCD3Q8IVD9 361 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 ZNF781Q8N8C0 355 aa16.2■□□□□ 0.18
NME3-204ENST00000563498 LINC01356Q8N9X3 169 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms