RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CCBE1Q6UXH8 406 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 CASP12Q6UXS9 341 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 B3GNT6Q6ZMB0 384 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 BTN2A1Q7KYR7 527 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 RRM2BQ7LG56 351 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 NUP54Q7Z3B4 507 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 GLRX5Q86SX6 157 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 CLVS1Q8IUQ0 354 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 ARMC10Q8N2F6 343 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 CADM2Q8N3J6 435 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 LNX2Q8N448 690 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 LRRC75AQ8NAA5 344 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 OR13C2Q8NGS9 318 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 OR2Y1Q8NGV0 311 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 TEX47Q8TBZ9 253 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 PHOSPHO1Q8TCT1 267 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 GPR119Q8TDV5 335 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 METTL21AQ8WXB1 218 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 MR1Q95460 341 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 MYDGFQ969H8 173 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 C12orf43Q96C57 262 aaKnown RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 NMD3Q96D46 503 aaKnown RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 COG8Q96MW5 612 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 TNFRSF13CQ96RJ3 184 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 DDOQ99489 341 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 CMKLR1Q99788 373 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF649Q9BS31 505 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 ZPBPQ9BS86 351 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 ULBP3Q9BZM4 244 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 SLC19A3Q9BZV2 496 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 OR52D1Q9H346 318 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 FGF20Q9NP95 211 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 PTTG2Q9NZH5 202 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 MYOTQ9UBF9 498 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 C19orf25Q9UFG5 118 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 ENPP5Q9UJA9 477 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 PCDHGB6Q9Y5F9 930 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 COMMD3-BMI1R4GMX3 469 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 PTPRZ1P23471 2315 aaPredicted RBP5.94□□□□□ -1.46
CAPN3-210ENST00000561817 SDK2Q58EX2 2172 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 MPDZO75970 2070 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 WDFY3Q8IZQ1 3526 aa5.94□□□□□ -1.46
CAPN3-210ENST00000561817 CFAP54Q96N23 3096 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 TRAV27A0A087WT01 109 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 LRRN3E7EW58 273 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 F5H0A9 414 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 TMX2-CTNND1H3BSU7 103 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 BOLA2-SMG1P6H3BVE0 249 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 WWP2O00308 870 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 KPNA4O00629 521 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 PRODHO43272 600 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 HCN1O60741 890 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 NPIPB7O75200 414 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CSO75390 466 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 OR7A10O76100 309 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 STK17BO94768 372 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 GABARAPO95166 117 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 RCBTB2O95199 551 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 FADS2O95864 444 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 MT-CO3P00414 261 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 PTHP01270 115 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 HMGN1P05114 100 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 KLK3P07288 261 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CELA2AP08217 269 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 RAB40ALP0C0E4 278 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 JMJD7P0C870 316 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 ADORA3P0DMS8 318 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 PNMTP11086 282 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SPINK2P20155 84 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 ENDOUP21128 410 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CSRP1P21291 193 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 PAX7P23759 505 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 IL12BP29460 328 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SLC1A3P43003 542 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 FBXW4P57775 412 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SUMO1P63165 101 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CRYZQ08257 329 aaKnown RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 FAPQ12884 760 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 AQP6Q13520 282 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SNAPC1Q16533 368 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF74Q16587 644 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CTF1Q16619 201 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 NTRK2Q16620 822 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF791Q3KP31 576 aaPredicted RBP5.93□□□□□ -1.46
CAPN3-210ENST00000561817 CLEC12AQ5QGZ9 265 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 DCAF12Q5T6F0 453 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 RPL13AP3Q6NVV1 102 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SMARCD3Q6STE5 483 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 RAB11FIP2Q7L804 512 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 PPP1R32Q7Z5V6 425 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 MARCH9Q86YJ5 346 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 SLC43A2Q8N370 569 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 LRRC17Q8N6Y2 441 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 ZNF485Q8NCK3 441 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 BBS1Q8NFJ9 593 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 OR2T33Q8NG76 320 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 OR11G2Q8NGC1 345 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 OR52I1Q8NGK6 324 aa5.93□□□□□ -1.46
CAPN3-210ENST00000561817 OR5L2Q8NGL0 311 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms