RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 BHLHE22Q8NFJ8 381 aaPredicted RBP12.32□□□□□ -0.44
TPM1-230ENST00000561266 ELOA3Q8NG57 546 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SLC26A7Q8TE54 656 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 NRGNQ92686 78 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 LRRC37BQ96QE4 947 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 PRSS27Q9BQR3 290 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 KLHL4Q9C0H6 718 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ALG2Q9H553 416 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 C12orf10Q9HB07 376 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 ADPRHL2Q9NX46 363 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 KLHL28Q9NXS3 571 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 KLHL9Q9P2J3 617 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 RPS6KB2Q9UBS0 482 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 KCNN3Q9UGI6 736 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 TAGLN3Q9UI15 199 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 PRDM4Q9UKN5 801 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SH3GLB1Q9Y371 365 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 SNX13Q9Y5W8 968 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 FLVCR1Q9Y5Y0 555 aa12.32□□□□□ -0.44
TPM1-230ENST00000561266 A0A1W2PPR1 153 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 AQP7P3A6NL99 342 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 CXCR6O00574 342 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 DNPH1O43598 174 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 FZD7O75084 574 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 IGHV3-9P01782 118 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 BGLAPP02818 100 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 THBDP07204 575 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 MSX2P35548 267 aaPredicted RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 OR3A2P47893 321 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 PDK3Q15120 406 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 OTUD3Q5T2D3 398 aaPredicted RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 PAQR6Q6TCH4 344 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 TSEN54Q7Z6J9 526 aaKnown RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 CXorf67Q86X51 503 aaPredicted RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 KIF18BQ86Y91 864 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 WDFY1Q8IWB7 410 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 MFSD8Q8NHS3 518 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 RNF217Q8TC41 542 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 ADAMTS16Q8TE57 1224 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 DNAJA4Q8WW22 397 aaPredicted RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 SLC25A36Q96CQ1 311 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 SLC47A1Q96FL8 570 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 MOGAT1Q96PD6 335 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 ZNF385AQ96PM9 386 aaKnown RBP12.31□□□□□ -0.44
TPM1-230ENST00000561266 PCDHAC1Q9H158 963 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 TMEM27Q9HBJ8 222 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 GP6Q9HCN6 339 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 ELOVL5Q9NYP7 299 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 SLC13A4Q9UKG4 626 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 TESMINQ9Y4I5 508 aa12.31□□□□□ -0.44
TPM1-230ENST00000561266 SH3D21A4FU49 640 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 FMO6PO60774 539 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 CTAG2O75638 210 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 ADAP00813 363 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 GPIP06744 558 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 PNMTP11086 282 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 EPXP11678 715 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 SSTR2P30874 369 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 SELENOWP63302 87 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
TPM1-230ENST00000561266 LGALS3BPQ08380 585 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 PIN1Q13526 163 aaPredicted RBP12.3□□□□□ -0.44
TPM1-230ENST00000561266 ZNF613Q6PF04 617 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 RANBP3LQ86VV4 465 aaPredicted RBP12.3□□□□□ -0.44
TPM1-230ENST00000561266 NKAIN4Q8IVV8 208 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 PIGXQ8TBF5 258 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 FAM222BQ8WU58 562 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 LRRC46Q96FV0 321 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 TPD52L3Q96J77 140 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 LURAP1Q96LR2 239 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 B3GAT1Q9P2W7 334 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 CD300AQ9UGN4 299 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 SLC7A7Q9UM01 511 aa12.3□□□□□ -0.44
TPM1-230ENST00000561266 A6NNC1 897 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 MS4A18H0YCH9 400 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 C16orf97H3BN30 126 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 J3KTA2 159 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 DCTN3O75935 186 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 AHSA1O95433 338 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 HPRP00739 348 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 GGT1P19440 569 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 IGHV1-2P23083 117 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 LOXP28300 417 aaPredicted RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 GRPRP30550 384 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 YAP1P46937 504 aaKnown RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 PCYT1AP49585 367 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 NCALDP61601 193 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 FOXD4Q12950 439 aaPredicted RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 KRT72Q14CN4 511 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 DAZAP2Q15038 168 aaPredicted RBP12.29□□□□□ -0.44
TPM1-230ENST00000561266 POU4F3Q15319 338 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 MS4A18Q3C1V0 323 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 NHLRC1Q6VVB1 395 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 DEF8Q6ZN54 512 aa12.29□□□□□ -0.44
TPM1-230ENST00000561266 BEND4Q6ZU67 534 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms