RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 VAMP5O95183 116 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 CCNA2P20248 432 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 THBS4P35443 961 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 SOAT1P35610 550 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 LIMS1P48059 325 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ARFIP2P53365 341 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 TRIP10Q15642 601 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ADRM1Q16186 407 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 WHAMMP3Q1A5X7 153 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ATP6AP1LQ52LC2 224 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 XKR7Q5GH72 579 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 C6orf136Q5SQH8 315 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 C10orf107Q8IVU9 208 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 CMIPQ8IY22 773 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 KRTCAP2Q8N6L1 136 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ANKK1Q8NFD2 765 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 IL17RDQ8NFM7 739 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 TMEM186Q96B77 213 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ZG16BQ96DA0 208 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 SLC35G5Q96KT7 338 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 JMJD8Q96S16 334 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 OR51I1Q9H343 314 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 GRIP1Q9Y3R0 1128 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 LIPT2A6NK58 231 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 LGI1O95970 557 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 IGFBP1P08833 259 aaPredicted RBP16.03■□□□□ 0.16
TPM1-226ENST00000560959 CBR1P16152 277 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 TACR3P29371 465 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 EVX1P49640 407 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 SH3BGRP55822 239 aaPredicted RBP16.03■□□□□ 0.16
TPM1-226ENST00000560959 PLAURQ03405 335 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 PRR31Q5SQ13 230 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 IL23RQ5VWK5 629 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 FRRS1Q6ZNA5 592 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 OLIG3Q7RTU3 272 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 SPATA21Q7Z572 469 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 PEG10Q86TG7 708 aaKnown RBP16.03■□□□□ 0.16
TPM1-226ENST00000560959 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
TPM1-226ENST00000560959 SVOPLQ8N434 492 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 TMEM99Q8N816 258 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 XAGE5Q8WWM1 108 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 LINC00470Q9BZP3 86 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 HIF1ANQ9NWT6 349 aa16.03■□□□□ 0.16
TPM1-226ENST00000560959 RNF103-CHMP3A0A140T963 221 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 RNASET2O00584 256 aaKnown RBP16.02■□□□□ 0.16
TPM1-226ENST00000560959 TFP02787 698 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 OR12D1P0DN82 309 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 CCNIQ14094 377 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 GSTA3Q16772 222 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 SLC9B1Q4ZJI4 515 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 TMEM225Q6GV28 225 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 NOA1Q8NC60 698 aaKnown RBP16.02■□□□□ 0.16
TPM1-226ENST00000560959 CKAP2Q8WWK9 683 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 ROPN1LQ96C74 230 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 RACGAP1Q9H0H5 632 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 DYNLRB1Q9NP97 96 aa16.02■□□□□ 0.16
TPM1-226ENST00000560959 ZC3H12DA2A288 527 aaKnown RBP16.01■□□□□ 0.15
TPM1-226ENST00000560959 TMEM233B4DJY2 109 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 RPL36A-HNRNPH2H7BZ11 118 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 NR5A2O00482 541 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 NPHS1O60500 1241 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 AKR7A3O95154 331 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 MSMBP08118 114 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 CLDN8P56748 225 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 PCLAFQ15004 111 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 CREB3L2Q70SY1 520 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 GPAT4Q86UL3 456 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 FNDC5Q8NAU1 212 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 CNOT9Q92600 299 aaKnown RBP16.01■□□□□ 0.15
TPM1-226ENST00000560959 NELFAQ9H3P2 528 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 ZNF696Q9H7X3 374 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 GIMAP2Q9UG22 337 aa16.01■□□□□ 0.15
TPM1-226ENST00000560959 CLDN24A6NM45 220 aa16■□□□□ 0.15
TPM1-226ENST00000560959 COPEO14579 308 aa16■□□□□ 0.15
TPM1-226ENST00000560959 CHRNGP07510 517 aa16■□□□□ 0.15
TPM1-226ENST00000560959 ADRA2AP08913 450 aa16■□□□□ 0.15
TPM1-226ENST00000560959 UQCRBP14927 111 aa16■□□□□ 0.15
TPM1-226ENST00000560959 UQCRC2P22695 453 aa16■□□□□ 0.15
TPM1-226ENST00000560959 ARR3P36575 388 aa16■□□□□ 0.15
TPM1-226ENST00000560959 P2RY4P51582 365 aa16■□□□□ 0.15
TPM1-226ENST00000560959 TMEM33P57088 247 aa16■□□□□ 0.15
TPM1-226ENST00000560959 IL1RL1Q01638 556 aa16■□□□□ 0.15
TPM1-226ENST00000560959 FUT5Q11128 374 aa16■□□□□ 0.15
TPM1-226ENST00000560959 OR7A5Q15622 319 aa16■□□□□ 0.15
TPM1-226ENST00000560959 PGS1Q32NB8 556 aa16■□□□□ 0.15
TPM1-226ENST00000560959 SHQ1Q6PI26 577 aaKnown RBP16■□□□□ 0.15
TPM1-226ENST00000560959 CCDC36Q8IYA8 594 aa16■□□□□ 0.15
TPM1-226ENST00000560959 CLECL1Q8IZS7 167 aa16■□□□□ 0.15
TPM1-226ENST00000560959 CLEC4FQ8N1N0 589 aa16■□□□□ 0.15
TPM1-226ENST00000560959 OR8J2Q8NGG1 315 aa16■□□□□ 0.15
TPM1-226ENST00000560959 CLDND2Q8NHS1 167 aa16■□□□□ 0.15
TPM1-226ENST00000560959 C3orf30Q96M34 536 aa16■□□□□ 0.15
TPM1-226ENST00000560959 C1orf50Q9BV19 199 aa16■□□□□ 0.15
TPM1-226ENST00000560959 MS4A5Q9H3V2 200 aa16■□□□□ 0.15
TPM1-226ENST00000560959 SEC61A2Q9H9S3 476 aa16■□□□□ 0.15
TPM1-226ENST00000560959 USP22Q9UPT9 525 aa16■□□□□ 0.15
TPM1-226ENST00000560959 CMAHPQ9Y471 501 aa16■□□□□ 0.15
TPM1-226ENST00000560959 PKD1L1Q8TDX9 2849 aa15.99■□□□□ 0.15
TPM1-226ENST00000560959 IGHV2OR16-5A0A0B4J2B6 119 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms