RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PPOXP50336 477 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 POLR2HP52434 150 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 IL1RL1Q01638 556 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 NAAAQ02083 359 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 NPRL3Q12980 569 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 SCGB2A2Q13296 93 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR7A5Q15622 319 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ADIPOQQ15848 244 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ADRM1Q16186 407 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 MAPK14Q16539 360 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMEM225Q6GV28 225 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR4F3Q6IEY1 312 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 UGT2A3Q6UWM9 527 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 GLCCI1Q86VQ1 547 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ADGRG3Q86Y34 549 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 CNPY4Q8N129 248 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZCCHC24Q8N2G6 241 aaKnown RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 SVOPLQ8N434 492 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR9K2Q8NGE7 335 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 PSMA8Q8TAA3 256 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZNF418Q8TF45 676 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 MZB1Q8WU39 189 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 WDR60Q8WVS4 1066 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 NEU4Q8WWR8 484 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 TUBGCP3Q96CW5 907 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZMYND19Q96E35 227 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ALKBH3Q96Q83 286 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZNF350Q9GZX5 532 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 TPK1Q9H3S4 243 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 SERHL2Q9H4I8 314 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 OBP2BQ9NPH6 170 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 ADPRHL2Q9NX46 363 aa9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 FBXO9Q9UK97 447 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMEM72A0PK05 275 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 CLDN24A6NM45 220 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 NR5A2O00482 541 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 AP3D1O14617 1153 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 DNAJA2O60884 412 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 BCAS1O75363 584 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 PDE5AO76074 875 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 VENTXO95231 258 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 GPIP06744 558 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 CECR9P0C854 216 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 IMPDH2P12268 514 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 KRT4P19013 534 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 NPR2P20594 1047 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 CXCR1P25024 350 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 TACR3P29371 465 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 KHKP50053 298 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 CDH15P55291 814 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 KCNJ10P78508 379 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 CEACAM7Q14002 265 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 SLC17A1Q14916 467 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 PCLAFQ15004 111 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 TRIP10Q15642 601 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 FAM174BQ3ZCQ3 159 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 TYW3Q6IPR3 259 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 PAQR6Q6TCH4 344 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 RNF165Q6ZSG1 346 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMEM99Q8N816 258 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR4F15Q8NGB8 312 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR1K1Q8NGR3 316 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 UBASH3BQ8TF42 649 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 AENQ8WTP8 325 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 UBLCP1Q8WVY7 318 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 ROPN1LQ96C74 230 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 COQ8BQ96D53 544 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZNF385AQ96PM9 386 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 TAPBPLQ9BX59 468 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 PLK3Q9H4B4 646 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 OSGIN1Q9UJX0 560 aa9.11□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZC3H12DA2A288 527 aaKnown RBP9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 OR6C65A6NJZ3 312 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 LILRA1O75019 489 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 ADRA2AP08913 450 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 TACSTD2P09758 323 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 FAM153BP0C7A2 387 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 THBS4P35443 961 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 DVL1P1P54792 670 aaPredicted RBP9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 LGALS3BPQ08380 585 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 EFNB3Q15768 340 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 C6orf136Q5SQH8 315 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 C1QTNF12Q5T7M4 302 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 NIPAL3Q6P499 406 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 ANKRD16Q6P6B7 361 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 ZCCHC23Q6ZST2 131 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 HDXQ7Z353 690 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 ANKRD46Q86W74 232 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 CADM2Q8N3J6 435 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 FAM71CQ8NEG0 241 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 CKAP2Q8WWK9 683 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 CNOT9Q92600 299 aaKnown RBP9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 TMEM45BQ96B21 275 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 PPP1R36Q96LQ0 422 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 ANKRD27Q96NW4 1050 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 DPY30Q9C005 99 aa9.1□□□□□ -0.95
CDC42BPB-207ENST00000560492 MARCOQ9UEW3 520 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms