RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 CPPED1Q9BRF8 314 aaPredicted RBP12.98□□□□□ -0.33
IDH3A-219ENST00000560414 NAA11Q9BSU3 229 aaPredicted RBP12.98□□□□□ -0.33
IDH3A-219ENST00000560414 POTEKPQ9BYX7 375 aa12.98□□□□□ -0.33
IDH3A-219ENST00000560414 LEF1Q9UJU2 399 aaPredicted RBP12.98□□□□□ -0.33
IDH3A-219ENST00000560414 GMEB1Q9Y692 573 aa12.98□□□□□ -0.33
IDH3A-219ENST00000560414 ARID1AO14497 2285 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 DSCAMO60469 2012 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 LIPT2A6NK58 231 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 EVPLLA8MZ36 301 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 GPR171O14626 319 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 TPST1O60507 370 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 EIF1BO60739 113 aaKnown RBP12.97□□□□□ -0.33
IDH3A-219ENST00000560414 MRPL33O75394 65 aaKnown RBP12.97□□□□□ -0.33
IDH3A-219ENST00000560414 ETS2P15036 469 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 AQP1P29972 269 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 HOXC12P31275 282 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 NR1H2P55055 460 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 FOXG1P55316 489 aaPredicted RBP12.97□□□□□ -0.33
IDH3A-219ENST00000560414 SCARB2Q14108 478 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 ADRM1Q16186 407 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 GLIPR1L2Q4G1C9 344 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 RUNDC3AQ59EK9 446 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
IDH3A-219ENST00000560414 LCE2CQ5TA81 110 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 FBXW9Q5XUX1 488 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 REEP3Q6NUK4 255 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 PAQR6Q6TCH4 344 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 SEZ6L2Q6UXD5 910 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 DHDDSQ86SQ9 333 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 SYT9Q86SS6 491 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 KRTAP1-3Q8IUG1 177 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 ZNF433Q8N7K0 673 aaPredicted RBP12.97□□□□□ -0.33
IDH3A-219ENST00000560414 PIGTQ969N2 578 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 CCL19Q99731 98 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 TMEM204Q9BSN7 226 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 ADPRHL2Q9NX46 363 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 TRIM33Q9UPN9 1127 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 NDUFAF1Q9Y375 327 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 FLVCR1Q9Y5Y0 555 aa12.97□□□□□ -0.33
IDH3A-219ENST00000560414 A8MVM7 634 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 ANGPT2O15123 496 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 SMPD2O60906 423 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 CNOT4O95628 575 aaKnown RBP12.96□□□□□ -0.33
IDH3A-219ENST00000560414 GPIP06744 558 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 GGT1P19440 569 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 COX5AP20674 150 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 SLC6A2P23975 617 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 PRKAR1BP31321 381 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 NKX6-1P78426 367 aaPredicted RBP12.96□□□□□ -0.33
IDH3A-219ENST00000560414 FAPQ12884 760 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 SELPLGQ14242 412 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 SLC17A1Q14916 467 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 NCMAPQ5T1S8 102 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 C1orf140Q5VVS0 124 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 CASP12Q6UXS9 341 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 C20orf204Q6ZNR8 217 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 OR52E4Q8NGH9 312 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 AKAP1Q92667 903 aaKnown RBP eCLIP12.96□□□□□ -0.33
IDH3A-219ENST00000560414 NEUROG1Q92886 237 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 TMEM120AQ9BXJ8 343 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 TMEM38AQ9H6F2 299 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 PRDM4Q9UKN5 801 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 CORO2BQ9UQ03 480 aa12.96□□□□□ -0.33
IDH3A-219ENST00000560414 CADP27708 2225 aa12.96□□□□□ -0.34
IDH3A-219ENST00000560414 RAI1Q7Z5J4 1906 aaPredicted RBP12.96□□□□□ -0.34
IDH3A-219ENST00000560414 DPRXA6NFQ7 191 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 CCT8L1PA6NM43 557 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 CLOCKO15516 846 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 NPIPB7O75200 414 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 RAD51DO75771 328 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 HTR2AP28223 471 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 MTPNP58546 118 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 EGR4Q05215 589 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 NFYCQ13952 458 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 PPA1Q15181 289 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 C9orf135Q5VTT2 229 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 DHRS4L2Q6PKH6 230 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 PTOV1Q86YD1 416 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 DPP10Q8N608 796 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 ZIC4Q8N9L1 334 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 OR9K2Q8NGE7 335 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 LILRB1Q8NHL6 650 aaPredicted RBP12.95□□□□□ -0.34
IDH3A-219ENST00000560414 SLC35B4Q969S0 331 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 PERPQ96FX8 193 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 ANKRD27Q96NW4 1050 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 ZNF385AQ96PM9 386 aaKnown RBP12.95□□□□□ -0.34
IDH3A-219ENST00000560414 CGREF1Q99674 301 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 PIP5K1AQ99755 562 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 WFDC6Q9BQY6 131 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 SIKE1Q9BRV8 207 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 TAPBPLQ9BX59 468 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 SLC7A10Q9NS82 523 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 FGFR1OP2Q9NVK5 253 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 ASB6Q9NWX5 421 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
IDH3A-219ENST00000560414 A0A1B0GWA3 101 aa12.94□□□□□ -0.34
IDH3A-219ENST00000560414 A0A1W2PR80 420 aa12.94□□□□□ -0.34
IDH3A-219ENST00000560414 CIB4A0PJX0 185 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms