RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CH25HO95992 272 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SFTPCP11686 197 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 IFI30P13284 250 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ANXA8P13928 327 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 POU2F1P14859 743 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 CPN1P15169 458 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 FKBP2P26885 142 aaKnown RBP8.41□□□□□ -1.06
HERC1-206ENST00000559996 EPHA2P29317 976 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 IFNA8P32881 189 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SFTPDP35247 375 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 POLR2IP36954 125 aaKnown RBP8.41□□□□□ -1.06
HERC1-206ENST00000559996 GPR4P46093 362 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TSPAN31Q12999 210 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 MYBPHQ13203 477 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TOMM20Q15388 145 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TRIP10Q15642 601 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 BCL2A1Q16548 175 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ZNF239Q16600 458 aaKnown RBP8.41□□□□□ -1.06
HERC1-206ENST00000559996 LRRC36Q1X8D7 754 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 EMC4Q5J8M3 183 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 OTUD3Q5T2D3 398 aaPredicted RBP8.41□□□□□ -1.06
HERC1-206ENST00000559996 C3orf33Q6P1S2 294 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 KLHL17Q6TDP4 642 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ZBTB49Q6ZSB9 765 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 LINC00471Q8N535 108 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TEX19Q8NA77 164 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 AQP11Q8NBQ7 271 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ATP6V1C2Q8NEY4 427 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 MFSD8Q8NHS3 518 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 RNF217Q8TC41 542 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 GNPDA2Q8TDQ7 276 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 MIB2Q96AX9 1013 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 FAM46AQ96IP4 442 aaKnown RBP8.41□□□□□ -1.06
HERC1-206ENST00000559996 GPR137Q96N19 417 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SFXN2Q96NB2 322 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TNFRSF13CQ96RJ3 184 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SLX1AQ9BQ83 275 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SRXN1Q9BYN0 137 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SERINC1Q9NRX5 453 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ASF1BQ9NVP2 202 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TAS2R5Q9NYW4 299 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TMCC3Q9ULS5 477 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 MGAT4BQ9UQ53 548 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 SIGLEC7Q9Y286 467 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TRAPPC4Q9Y296 219 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 ATRXP46100 2492 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 GTF3C1Q12789 2109 aa8.41□□□□□ -1.06
HERC1-206ENST00000559996 TLN1Q9Y490 2541 aaKnown RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 HTR3EA5X5Y0 456 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 TNFSF11O14788 317 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 TFECO14948 347 aaPredicted RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 ATXN7O15265 892 aaPredicted RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 RAMP1O60894 148 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 E2F6O75461 281 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 PMS2P2O95744 297 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ACTL6AO96019 429 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ADAP00813 363 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 CRYABP02511 175 aaKnown RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 FPR3P25089 353 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 UQCRC1P31930 480 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 DIO1P49895 249 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ALDH3A2P51648 485 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 AGFG1P52594 562 aaKnown RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 RPS4XP62701 263 aaKnown RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 DAG1Q14118 895 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 FAM69AQ5T7M9 428 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 C5orf46Q6UWT4 87 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 PLXDC2Q6UX71 529 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 WDFY1Q8IWB7 410 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 OR8D4Q8NGM9 314 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 SLC25A43Q8WUT9 341 aaPredicted RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 OSTF1Q92882 214 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 DDIT4LQ96D03 193 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 SGTBQ96EQ0 304 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ZNF845Q96IR2 970 aaPredicted RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 KLHL15Q96M94 604 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 OR5B2Q96R09 309 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 C9orf16Q9BUW7 83 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 PLA2G12AQ9BZM1 189 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 PRDM14Q9GZV8 571 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 MCCC2Q9HCC0 563 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 FANCFQ9NPI8 374 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 IL20Q9NYY1 176 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 SELENONQ9NZV5 590 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ING1Q9UK53 422 aaPredicted RBP8.4□□□□□ -1.06
HERC1-206ENST00000559996 HDGFL3Q9Y3E1 203 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 KIAA1549Q9HCM3 1950 aa8.4□□□□□ -1.06
HERC1-206ENST00000559996 ALPK2Q86TB3 2170 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 SHANK1Q9Y566 2161 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 TRAV27A0A087WT01 109 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 FAM47E-STBD1D6RA91 191 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 PLPP3O14495 311 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 OR2T1O43869 369 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 HPRP00739 348 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 GRPRP30550 384 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 NTF4P34130 210 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ARHGDIAP52565 204 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 RAC3P60763 192 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 ZP4Q12836 540 aa8.39□□□□□ -1.07
HERC1-206ENST00000559996 COX10Q12887 443 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms