RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 A0A1W2PNR3 127 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 FZD7O75084 574 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 PTP4A3O75365 173 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 ACTL6AO96019 429 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 CRYABP02511 175 aaKnown RBP16.25■□□□□ 0.19
CLPX-203ENST00000558958 SFTPCP11686 197 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 BMP7P18075 431 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 CDH2P19022 906 aaPredicted RBP16.25■□□□□ 0.19
CLPX-203ENST00000558958 LHX2P50458 406 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 CLDN20P56880 219 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 FHL1Q13642 323 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 MFSD13AQ14CX5 517 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 TMPPEQ6ZT21 453 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 GGNQ86UU5 652 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 KIF18BQ86Y91 864 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 ABTB1Q969K4 478 aaPredicted RBP16.25■□□□□ 0.19
CLPX-203ENST00000558958 MIB2Q96AX9 1013 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 MBOAT4Q96T53 435 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 ZNF184Q99676 751 aaPredicted RBP16.25■□□□□ 0.19
CLPX-203ENST00000558958 PLSCR2Q9NRY7 297 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 ENOPH1Q9UHY7 261 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 SIGLEC7Q9Y286 467 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 TRAPPC4Q9Y296 219 aa16.25■□□□□ 0.19
CLPX-203ENST00000558958 SPENQ96T58 3664 aaKnown RBP16.25■□□□□ 0.19
CLPX-203ENST00000558958 TRAV27A0A087WT01 109 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 A0A0J9YW62 118 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 A0A1B0GVC2 190 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 NPIPA5E9PKD4 350 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ERVH48-1M5A8F1 160 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 WISP2O76076 250 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 SOX14O95416 240 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 PMS2P2O95744 297 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 POLR2IP36954 125 aaKnown RBP16.24■□□□□ 0.19
CLPX-203ENST00000558958 DIO1P49895 249 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 CLDN15P56746 228 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ESRRGP62508 458 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 RPS4XP62701 263 aaKnown RBP16.24■□□□□ 0.19
CLPX-203ENST00000558958 NPRL3Q12980 569 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 OR7A5Q15622 319 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 CTU2Q2VPK5 515 aaKnown RBP16.24■□□□□ 0.19
CLPX-203ENST00000558958 SLC36A3Q495N2 470 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ZBED5Q49AG3 693 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 VASNQ6EMK4 673 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ZNF620Q6ZNG0 422 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ESPNLQ6ZVH7 1005 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 MAMDC2Q7Z304 686 aaPredicted RBP16.24■□□□□ 0.19
CLPX-203ENST00000558958 CLDN22Q8N7P3 220 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 TEX19Q8NA77 164 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 OR51A7Q8NH64 312 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ADGRG7Q96K78 797 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 TNFRSF13CQ96RJ3 184 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 TAPBPLQ9BX59 468 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 RIBC2Q9H4K1 309 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 EGLN3Q9H6Z9 239 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 EXO5Q9H790 373 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 IL20Q9NYY1 176 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 NPIPA1Q9UND3 350 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 CDH10Q9Y6N8 788 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 ZNF407Q9C0G0 2248 aa16.24■□□□□ 0.19
CLPX-203ENST00000558958 H0YC42 278 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 SULT2B1O00204 365 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 IGFBP1P08833 259 aaPredicted RBP16.23■□□□□ 0.19
CLPX-203ENST00000558958 TSPAN19P0C672 248 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 ZNF708P17019 499 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 EPHA2P29317 976 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 GRPRP30550 384 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 HSPA13P48723 471 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
CLPX-203ENST00000558958 CRISP1P54107 249 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 TPD52P55327 224 aaPredicted RBP16.23■□□□□ 0.19
CLPX-203ENST00000558958 CLDN18P56856 261 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 NUP107P57740 925 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 FXYD6P3P58550 94 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 BCL2A1Q16548 175 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 ANKDD1AQ495B1 522 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 FAM180AQ6UWF9 173 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 GRIP2Q9C0E4 1043 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 MCCC2Q9HCC0 563 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 ALKBH4Q9NXW9 302 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 MRPL39Q9NYK5 338 aaKnown RBP16.23■□□□□ 0.19
CLPX-203ENST00000558958 SPRR3Q9UBC9 169 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 CORINQ9Y5Q5 1042 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 NBEAQ8NFP9 2946 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 USP24Q9UPU5 2620 aa16.23■□□□□ 0.19
CLPX-203ENST00000558958 E9PQ18 207 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 H3BN98 237 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 EIF1AYO14602 144 aaKnown RBP16.22■□□□□ 0.19
CLPX-203ENST00000558958 TNFSF11O14788 317 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 SEC14L5O43304 696 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 RCBTB2O95199 551 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 HIST1H2ABP04908 130 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 KLRB1Q12918 225 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 ST3GAL2Q16842 350 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 ZNF324BQ6AW86 544 aaPredicted RBP16.22■□□□□ 0.19
CLPX-203ENST00000558958 RPL13AP3Q6NVV1 102 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 SMARCD3Q6STE5 483 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 HIST3H2AQ7L7L0 130 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 UBQLNLQ8IYU4 475 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 DHRSXQ8N5I4 330 aa16.22■□□□□ 0.19
CLPX-203ENST00000558958 SCAIQ8N9R8 606 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms