RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PRR23AA6NEV1 266 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM74A7A6NL05 159 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF716A6NP11 495 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 E7EWF7 191 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 XKRYO14609 159 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 RS1O15537 224 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MLNRO43193 412 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 KBTBD11O94819 623 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 DUS4LO95620 317 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 IL1BP01584 269 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 IQCF3P0C7M6 154 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF735P0CB33 412 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 RALBP11234 206 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CX3CR1P49238 355 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CRIP2P52943 208 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRMT2P55345 433 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 NDUFV3P56181 108 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SCRN3Q0VDG4 424 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MERTKQ12866 999 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF154Q13106 437 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 OXA1LQ15070 435 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 QPRTQ15274 297 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CHRNA6Q15825 494 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 KNOP1Q1ED39 458 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM74A3Q4VXF1 159 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRR30Q53SZ7 412 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ACER2Q5QJU3 275 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 STUMQ69YW2 141 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR4F3Q6IEY1 312 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 NEPROQ6NW34 567 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 RFWD3Q6PCD5 774 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 KCNMB4Q86W47 210 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 GPD1LQ8N335 351 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C9orf106Q8NAJ2 232 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 Q8NBF4 154 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR2T34Q8NGX1 318 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SPATA3Q8NHX4 192 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 FBXO32Q969P5 355 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF501Q96CX3 271 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C10orf35Q96D05 121 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAGEB18Q96M61 343 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 OPALINQ96PE5 141 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCT8L2Q96SF2 557 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C19orf24Q9BVV8 132 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 NMUR2Q9GZQ4 415 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SPHK2Q9NRA0 654 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 UXTQ9UBK9 157 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 UBQLN1Q9UMX0 589 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 KLF2Q9Y5W3 355 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 BRCA1P38398 1863 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 COL2A1P02458 1487 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MYH7P12883 1935 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLIT2O94813 1529 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CDK13Q14004 1512 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRAV6A0A075B6T7 132 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRBV5-4A0A0C4DH59 114 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 A6NDN8 102 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRDCB7Z8K6 153 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 K7EQG2 157 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF264O43296 627 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SNAP91O60641 907 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ERLIN1O75477 346 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLITRK3O94933 977 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCNB1P14635 433 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 HNF1AP20823 631 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 GDI1P31150 447 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 BTDP43251 543 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAGEA9P43362 315 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 RPL29P47914 159 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ERFP50548 548 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 DAP3P51398 398 aaKnown RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 HMGCS2P54868 508 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PLOD1Q02809 727 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 KLRB1Q12918 225 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 NECTIN1Q15223 517 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRR4Q16378 134 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAPK6Q16659 721 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 PCK2Q16822 640 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C17orf58Q2M2W7 97 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 XKR4Q5GH76 650 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZC2HC1BQ5TFG8 222 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C1orf146Q5VVC0 180 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC22A10Q63ZE4 541 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZSCAN25Q6NSZ9 544 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 LRRC31Q6UY01 552 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF771Q7L3S4 317 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MOB1BQ7L9L4 216 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 C5orf24Q7Z6I8 188 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CATSPERDQ86XM0 798 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SKA3Q8IX90 412 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC39A11Q8N1S5 342 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF740Q8NDX6 193 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CHDHQ8NE62 594 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ATXN7L3BQ96GX2 97 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 CFAP53Q96M91 514 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 SH3GL1Q99961 368 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAPKAP1Q9BPZ7 522 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 ROGDIQ9GZN7 287 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 LRRN3Q9H3W5 708 aa1.09□□□□□ -2.23
CTDSPL2-202ENST00000558373 EHD1Q9H4M9 534 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms