RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
SNX1-203ENST00000558040 GMPPBQ9Y5P6 360 aa15.19■□□□□ 0.02
SNX1-203ENST00000558040 NCOR2Q9Y618 2525 aa15.19■□□□□ 0.02
SNX1-203ENST00000558040 TRAV27A0A087WT01 109 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 LIPT2A6NK58 231 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 LRRN3E7EW58 273 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PTP4A3O75365 173 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 NDUFB2O95178 105 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PMS2P2O95744 297 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 ACTL6AO96019 429 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 TP53P04637 393 aaPredicted RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 CELA3AP09093 270 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SLC6A6P31641 620 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 POLR2IP36954 125 aaKnown RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 SMSP52788 366 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 RPS4XP62701 263 aaKnown RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 CSNK2A1P68400 391 aaPredicted RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 PTGES3Q15185 160 aaKnown RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 OR7A5Q15622 319 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PDSS1Q5T2R2 415 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SLC27A4Q6P1M0 643 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 ESPNLQ6ZVH7 1005 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 LSRQ86X29 649 aaPredicted RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 LRRC17Q8N6Y2 441 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SCAIQ8N9R8 606 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SETD9Q8NE22 299 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 OR5J2Q8NH18 312 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 NEIL3Q8TAT5 605 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PNPLA2Q96AD5 504 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 HRASLS5Q96KN8 279 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 TNFRSF13CQ96RJ3 184 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PITX2Q99697 317 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 APOL4Q9BPW4 351 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 ANKRD60Q9BZ19 345 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 PRRG3Q9BZD7 231 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SLC6A15Q9H2J7 730 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 EXO5Q9H790 373 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 MRPL39Q9NYK5 338 aaKnown RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 ZMIZ1Q9ULJ6 1067 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 NDRG4Q9ULP0 352 aaKnown RBP15.18■□□□□ 0.02
SNX1-203ENST00000558040 HIF3AQ9Y2N7 669 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 SLC6A5Q9Y345 797 aa15.18■□□□□ 0.02
SNX1-203ENST00000558040 TRGV5A0A0B4J1U4 118 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 ZAR1LA6NP61 321 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 FTCDNL1E5RQL4 147 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SULT2B1O00204 365 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 DENRO43583 198 aaKnown RBP15.17■□□□□ 0.02
SNX1-203ENST00000558040 FZD7O75084 574 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 OR6A2O95222 327 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 CRYABP02511 175 aaKnown RBP15.17■□□□□ 0.02
SNX1-203ENST00000558040 IMPDH2P12268 514 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SHC1P29353 583 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 GRPRP30550 384 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 OR2B6P58173 313 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SLC35A1P78382 337 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 LTBQ06643 244 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 PMS2P3Q13401 168 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 MED21Q13503 144 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SGCBQ16585 318 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 RNFT1Q5M7Z0 435 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 TMPPEQ6ZT21 453 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 OR2T33Q8NG76 320 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 MIB2Q96AX9 1013 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 DNAJA3Q96EY1 480 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SAMD8Q96LT4 415 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 TSSK6Q9BXA6 273 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 DEFB127Q9H1M4 99 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 SLC25A19Q9HC21 320 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 MCCC2Q9HCC0 563 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 ZNF71Q9NQZ8 489 aaPredicted RBP15.17■□□□□ 0.02
SNX1-203ENST00000558040 LHX6Q9UPM6 363 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 BAIAP2Q9UQB8 552 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 NCKAP5O14513 1909 aa15.17■□□□□ 0.02
SNX1-203ENST00000558040 A0A1W2PNR3 127 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 E9PQ18 207 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 BLOC1S5-TXNDC5H3BN57 136 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 M0R082 166 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 DNPH1O43598 174 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 IGHG3P01860 377 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 OPN1LWP04000 364 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 IGFBP1P08833 259 aaPredicted RBP15.16■□□□□ 0.02
SNX1-203ENST00000558040 SFTPCP11686 197 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 EPHA2P29317 976 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 UQCRC1P31930 480 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 GGT2P36268 569 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 RPL4P36578 427 aaKnown RBP15.16■□□□□ 0.02
SNX1-203ENST00000558040 GIPRP48546 466 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 DIO1P49895 249 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 CDC42P60953 191 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 GINS1Q14691 196 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 BCL2A1Q16548 175 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 PLEKHN1Q494U1 663 aaPredicted RBP15.16■□□□□ 0.02
SNX1-203ENST00000558040 SLX4IPQ5VYV7 408 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 CASP12Q6UXS9 341 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 C8orf59Q8N0T1 100 aaPredicted RBP15.16■□□□□ 0.02
SNX1-203ENST00000558040 DEPDC4Q8N2C3 294 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 MEIOBQ8N635 442 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 OR8D4Q8NGM9 314 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 ZNF417Q8TAU3 575 aa15.16■□□□□ 0.02
SNX1-203ENST00000558040 ABTB1Q969K4 478 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms