RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 B3GNT6Q6ZMB0 384 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 SLC16A12Q6ZSM3 486 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 NUP54Q7Z3B4 507 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 GLRX5Q86SX6 157 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 OAFQ86UD1 273 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 MARCH9Q86YJ5 346 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 WFDC3Q8IUB2 231 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 CDK20Q8IZL9 346 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 LNX2Q8N448 690 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 STX19Q8N4C7 294 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 DEFB124Q8NES8 71 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 OR10G3Q8NGC4 313 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 OR52I1Q8NGK6 324 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 B4GALNT2Q8NHY0 566 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 M1APQ8TC57 530 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 RORBQ92753 470 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 C12orf43Q96C57 262 aaKnown RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 LGALS12Q96DT0 336 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 KTI12Q96EK9 354 aaPredicted RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 COG8Q96MW5 612 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 MOGAT1Q96PD6 335 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 SLC38A2Q96QD8 506 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 OR5M11Q96RB7 305 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 RASL10BQ96S79 203 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 NPAS1Q99742 590 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 TMEM43Q9BTV4 400 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 FUNDC2Q9BWH2 189 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 HCAR1Q9BXC0 346 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 CDCA4Q9BXL8 241 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 DEFB126Q9BYW3 111 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 SLC19A3Q9BZV2 496 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 C12orf10Q9HB07 376 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 GALNT9Q9HCQ5 603 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 MMP25Q9NPA2 562 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 HINT3Q9NQE9 182 aaKnown RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 MRPS18AQ9NVS2 196 aaKnown RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 OSGIN1Q9UJX0 560 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 TCFL5Q9UL49 500 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 FARSAQ9Y285 508 aaKnown RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 RPL36Q9Y3U8 105 aaKnown RBP6.69□□□□□ -1.34
SPG11-204ENST00000557866 COMMD3-BMI1R4GMX3 469 aa6.69□□□□□ -1.34
SPG11-204ENST00000557866 IGLV3-32A0A0A0MS00 114 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 TMEM72A0PK05 275 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ZC3H12DA2A288 527 aaKnown RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 CCDC182A6NF36 153 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 FAM183AA6NL82 134 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CDC40O60508 579 aaKnown RBP eCLIP6.68□□□□□ -1.34
SPG11-204ENST00000557866 NPIPB7O75200 414 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 FBXO24O75426 580 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 APOL3O95236 402 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PPP1R3DO95685 299 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 IGF2P01344 180 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CD8BP10966 210 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CCNA2P20248 432 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ENDOUP21128 410 aaKnown RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 ITPKBP27987 946 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PSMB9P28065 219 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 LIPAP38571 399 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 SOX3P41225 446 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 P2RX1P51575 399 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 DLX5P56178 289 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 RPS4XP62701 263 aaKnown RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 Q0VFX4 171 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 LSAMPQ13449 338 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 AQP6Q13520 282 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CBFBQ13951 182 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 INPP5JQ15735 1006 aaPredicted RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 EXT1Q16394 746 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ZNF74Q16587 644 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 NTRK2Q16620 822 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 COL28A1Q2UY09 1125 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 C3orf38Q5JPI3 329 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PAQR6Q6TCH4 344 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 RTL4Q6ZR62 310 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 NDUFAF7Q7L592 441 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 IGFN1Q86VF2 1251 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ADGRG3Q86Y34 549 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ANKRD13BQ86YJ7 626 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 CPOQ8IVL8 374 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 MISPQ8IVT2 679 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 LRRC75AQ8NAA5 344 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 OR52L1Q8NGH7 329 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 MOSPD2Q8NHP6 518 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ZNF563Q8TA94 476 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ZNF420Q8TAQ5 688 aaPredicted RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 LIPHQ8WWY8 451 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PTP4A1Q93096 173 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 TAAR8Q969N4 342 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 NTNG2Q96CW9 530 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 TMCO6Q96DC7 493 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 SPACA9Q96E40 222 aaPredicted RBP6.68□□□□□ -1.34
SPG11-204ENST00000557866 RNFT2Q96EX2 444 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 TMEM80Q96HE8 168 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 DDOQ99489 341 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 PTDSS2Q9BVG9 487 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 IFT27Q9BW83 186 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 TAPBPLQ9BX59 468 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 MED20Q9H944 212 aa6.68□□□□□ -1.34
SPG11-204ENST00000557866 ZNF160Q9HCG1 818 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms