RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PDHXO00330 501 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 HSD17B6O14756 317 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 PPP1R2P9O14990 202 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 UGT1A9O60656 530 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 FCN3O75636 299 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ERLIN2O94905 339 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 LYPD3O95274 346 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 C1orf105O95561 183 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 TSPAN13O95857 204 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 IGHV3-9P01782 118 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 HLA-HP01893 362 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 UBTFL1P0CB47 393 aaPredicted RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 CCL2P13500 99 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 DPEP1P16444 411 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 CALCRP30988 508 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 NPBWR2P48146 333 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 PSMC5P62195 406 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 LCN2P80188 198 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 FKBP3Q00688 224 aaKnown RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 TLE4Q04727 773 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 COTL1Q14019 142 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 DPYSL3Q14195 570 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 NCF4Q15080 339 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 NECTIN1Q15223 517 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 VAMP3Q15836 100 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 C14orf28Q4W4Y0 310 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 KLHL22Q53GT1 634 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 VWA2Q5GFL6 755 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SAMD4BQ5PRF9 694 aaKnown RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 PPM1LQ5SGD2 360 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 C6orf183Q5T699 404 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 GPR107Q5VW38 600 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 OR52E8Q6IFG1 317 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 C6orf89Q6UWU4 347 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZNF575Q86XF7 245 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 APRG1Q8IVJ8 170 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ARHGAP18Q8N392 663 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 METTL4Q8N3J2 472 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 MS4A15Q8N5U1 240 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZNF491Q8N8L2 437 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 LRRC75AQ8NAA5 344 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SUMF1Q8NBK3 374 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZNF248Q8NDW4 579 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 OR2T6Q8NHC8 308 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ANGPTL6Q8NI99 470 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZNF519Q8TB69 540 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZPLD1Q8TCW7 415 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SETD7Q8WTS6 366 aaKnown RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 CCDC12Q8WUD4 166 aaPredicted RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 NUDCD2Q8WVJ2 157 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 FAM131CQ96AQ9 280 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ATXN7L3BQ96GX2 97 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 MS4A14Q96JA4 679 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 C9orf72Q96LT7 481 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 GLT1D1Q96MS3 346 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 CATSPER2Q96P56 530 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 CYP2S1Q96SQ9 504 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 LGMNQ99538 433 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SLC29A1Q99808 456 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 ACBD6Q9BR61 282 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SYT11Q9BT88 431 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SCAND2PQ9GZW5 306 aaPredicted RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 CSNK1G1Q9HCP0 422 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 THUMPD1Q9NXG2 353 aaKnown RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 UBAP1Q9NZ09 502 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 STX18Q9P2W9 335 aaKnown RBP3.13□□□□□ -1.91
TDP1-217ENST00000557782 KPTNQ9Y664 436 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 SH3TC1Q8TE82 1336 aa3.13□□□□□ -1.91
TDP1-217ENST00000557782 TEX48A0A1B0GUV7 120 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ARHGEF33A8MVX0 844 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 SIVA1O15304 175 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ZNF254O75437 659 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 SCELO95171 688 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 CLDN1O95832 211 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 IFNW1P05000 195 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 DCNP07585 359 aaKnown RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 CD48P09326 243 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 PRPS2P11908 318 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 FASP25445 335 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 LCN1P31025 176 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 EPHX2P34913 555 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 HTR2BP41595 481 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 MRPS11P82912 194 aaKnown RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 ILF3Q12906 894 aaKnown RBP eCLIP3.12□□□□□ -1.91
TDP1-217ENST00000557782 KCNJ11Q14654 390 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 KRTAP15-1Q3LI76 137 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 CARD16Q5EG05 197 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 BSPRYQ5W0U4 402 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ZNF57Q68EA5 555 aaPredicted RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 PWWP2BQ6NUJ5 590 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 SPESP1Q6UW49 350 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 ZNF836Q6ZNA1 936 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 Q6ZSR3 168 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 COPS6Q7L5N1 327 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 TIPARPQ7Z3E1 657 aaKnown RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 APLFQ8IW19 511 aaPredicted RBP3.12□□□□□ -1.91
TDP1-217ENST00000557782 MYOCDQ8IZQ8 938 aa3.12□□□□□ -1.91
TDP1-217ENST00000557782 LIX1Q8N485 282 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms