RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 MED17Q9NVC6 651 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 TMCC3Q9ULS5 477 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 AP4B1Q9Y6B7 739 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 CCDC168Q8NDH2 2452 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 HCFC1P51610 2035 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 ARHGAP21Q5T5U3 1957 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 KIAA1549Q9HCM3 1950 aa8.64□□□□□ -1.03
ACTN1-215ENST00000555616 MED12Q93074 2177 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 A0A1W2PNV4 684 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 A0A1W2PRQ8 180 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SHISA8B8ZZ34 492 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 EEF1E1-BLOC1S5C9J1V9 151 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 G3V2T6 193 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 H0YC42 278 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 H3BML4 177 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 J3KTA2 159 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 FFAR1O14842 300 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SEC14L5O43304 696 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 EEF1E1O43324 174 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 CHP2O43745 196 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 GMFGO60234 142 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TNFSF13O75888 250 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 PRSS23O95084 383 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 PNMTP11086 282 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 FCGR2AP12318 317 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ZNF23P17027 643 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 FPR1P21462 350 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 HTR2AP28223 471 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 DNAJA1P31689 397 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 UQCRC1P31930 480 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SLC1A3P43003 542 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 HTR3AP46098 478 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 IDH2P48735 452 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SUCLG1P53597 346 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TPD52P55327 224 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 MYBPHQ13203 477 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 DGCR6Q14129 220 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 OR1Q1Q15612 314 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TRIP10Q15642 601 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ALG10BQ5I7T1 473 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 OGFRL1Q5TC84 451 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 EEF1A1P5Q5VTE0 462 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 OR2A2Q6IF42 318 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ULK3Q6PHR2 472 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 PLXDC2Q6UX71 529 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TSEN54Q7Z6J9 526 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 HIPK1Q86Z02 1210 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ZDHHC13Q8IUH4 622 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 GCNT2Q8N0V5 402 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SVOPLQ8N434 492 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 ICA1LQ8NDH6 482 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 RNF217Q8TC41 542 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 GPR119Q8TDV5 335 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SLC38A4Q969I6 547 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 EME1Q96AY2 570 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 INTS12Q96CB8 462 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 NRBF2Q96F24 287 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SLC41A3Q96GZ6 507 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 MPP4Q96JB8 637 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 DHRS1Q96LJ7 313 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 NPAS1Q99742 590 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 KLHDC3Q9BQ90 382 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
ACTN1-215ENST00000555616 SEMA6AQ9H2E6 1030 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 VCXQ9H320 206 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 PIGMQ9H3S5 423 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 RNF122Q9H9V4 155 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 CTPS2Q9NRF8 586 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 RHCGQ9UBD6 479 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 A4GNTQ9UNA3 340 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 VDAC3Q9Y277 283 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 CACNA1DQ01668 2161 aa8.63□□□□□ -1.03
ACTN1-215ENST00000555616 HRNRQ86YZ3 2850 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 A0A0B4J2E0 115 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 A0A1B0GWA3 101 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 A0A1B0GX12 115 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 ETV2O00321 342 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 TPST2O60704 377 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 ADAM11O75078 769 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 ELK4P28324 431 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 IFNGR2P38484 337 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 EIF1P41567 113 aaKnown RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 KIR2DL3P43628 341 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 AGFG1P52594 562 aaKnown RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 HMGA2P52926 109 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 RPS3AP61247 264 aaKnown RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 FOXF1Q12946 379 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 PON3Q15166 354 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 QPRTQ15274 297 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 GUSBP1Q15486 140 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 CTU2Q2VPK5 515 aaKnown RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 HMBOX1Q6NT76 420 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 SHQ1Q6PI26 577 aaKnown RBP8.62□□□□□ -1.03
ACTN1-215ENST00000555616 CHMP1BQ7LBR1 199 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 RRM2BQ7LG56 351 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 GRINAQ7Z429 371 aa8.62□□□□□ -1.03
ACTN1-215ENST00000555616 CDH24Q86UP0 819 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms