RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 TRIM64A6NGJ6 449 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 TRIM64BA6NI03 449 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 AQP7P3A6NL99 342 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ELOA3DA6NLF2 546 aaPredicted RBP21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ABCD4O14678 606 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 AHSA1O95433 338 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ARAFP10398 606 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ETS2P15036 469 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 GTF2E2P29084 291 aaKnown RBP21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ZNF83P51522 516 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 CDK6Q00534 326 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ELOA3BQ3SY89 546 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 REEP3Q6NUK4 255 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 TMEM108Q6UXF1 575 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 AAED1Q7RTV5 226 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ELOA3Q8NG57 546 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 CKAP2Q8WWK9 683 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 IGFBPL1Q8WX77 278 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 TRMT61AQ96FX7 289 aaKnown RBP21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ALG2Q9H553 416 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 SLC7A10Q9NS82 523 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 ZNF701Q9NV72 531 aaPredicted RBP21.53■■□□□ 1.04
PRKCH-216ENST00000555542 NPAP1Q9NZP6 1156 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 POU2F3Q9UKI9 436 aa21.53■■□□□ 1.04
PRKCH-216ENST00000555542 KRT33AO76009 404 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 ITGA5P08648 1049 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 PAX1P15863 534 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 PRKAR1BP31321 381 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 CDH11P55287 796 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 NCALDP61601 193 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 TGFBR3Q03167 851 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 TSPO2Q5TGU0 170 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 CIARTQ8N365 385 aaPredicted RBP21.52■■□□□ 1.04
PRKCH-216ENST00000555542 SLC35B4Q969S0 331 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 TMEM45BQ96B21 275 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 SLC25A36Q96CQ1 311 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 TRIM2Q9C040 744 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 FAIMQ9NVQ4 179 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 CISD1Q9NZ45 108 aaKnown RBP21.52■■□□□ 1.04
PRKCH-216ENST00000555542 DCTN4Q9UJW0 460 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 SLC13A4Q9UKG4 626 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 TRIM33Q9UPN9 1127 aa21.52■■□□□ 1.04
PRKCH-216ENST00000555542 M0R1B8 84 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 SOD3P08294 240 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 SLC6A2P23975 617 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 FOXG1P55316 489 aaPredicted RBP21.51■■□□□ 1.03
PRKCH-216ENST00000555542 SCARB2Q14108 478 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 GABRA6Q16445 453 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 RNF217Q8TC41 542 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 STK35Q8TDR2 534 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 POM121Q96HA1 1249 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 COX4I2Q96KJ9 171 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 ZNF385AQ96PM9 386 aaKnown RBP21.51■■□□□ 1.03
PRKCH-216ENST00000555542 NPHS2Q9NP85 383 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 LEF1Q9UJU2 399 aaPredicted RBP21.51■■□□□ 1.03
PRKCH-216ENST00000555542 MAGED1Q9Y5V3 778 aaPredicted RBP21.51■■□□□ 1.03
PRKCH-216ENST00000555542 SLC25A15Q9Y619 301 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 ZFHX3Q15911 3703 aa21.51■■□□□ 1.03
PRKCH-216ENST00000555542 TMEM229AB2RXF0 380 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 CDH2P19022 906 aaPredicted RBP21.5■■□□□ 1.03
PRKCH-216ENST00000555542 AQP1P29972 269 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 CDKN1AP38936 164 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 RPS5P46782 204 aaKnown RBP21.5■■□□□ 1.03
PRKCH-216ENST00000555542 LTBQ06643 244 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 SLC22A25Q6T423 547 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 ABHD12BQ7Z5M8 362 aaPredicted RBP21.5■■□□□ 1.03
PRKCH-216ENST00000555542 C10orf111Q8N326 155 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 POMGNT2Q8NAT1 580 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 RADILQ96JH8 1075 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 MUS81Q96NY9 551 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 ZNF607Q96SK3 696 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 C1QTNF6Q9BXI9 259 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 SLCO5A1Q9H2Y9 848 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 SLC52A3Q9NQ40 469 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 SELENONQ9NZV5 590 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 MGAT4BQ9UQ53 548 aa21.5■■□□□ 1.03
PRKCH-216ENST00000555542 SETD2Q9BYW2 2564 aaPredicted RBP21.5■■□□□ 1.03
PRKCH-216ENST00000555542 PRORSD1PA6NEY8 169 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 SHISA9B4DS77 424 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 ANGPT2O15123 496 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 VAMP5O95183 116 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 DANCRP0C864 163 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 PTAFRP25105 342 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 KLHL24Q6TFL4 600 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 DEPDC4Q8N2C3 294 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 C17orf78Q8N4C9 275 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 C1orf162Q8NEQ5 155 aaPredicted RBP21.49■■□□□ 1.03
PRKCH-216ENST00000555542 IKZF5Q9H5V7 419 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 PIF1Q9H611 641 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 TMEM38AQ9H6F2 299 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 ANGPT4Q9Y264 503 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 RASD1Q9Y272 281 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 AMDHD2Q9Y303 409 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 NDUFAF1Q9Y375 327 aa21.49■■□□□ 1.03
PRKCH-216ENST00000555542 TRBV5-3A0A0A0MS03 114 aa21.48■■□□□ 1.03
PRKCH-216ENST00000555542 PDLIM1O00151 329 aa21.48■■□□□ 1.03
PRKCH-216ENST00000555542 SERPINB7O75635 380 aa21.48■■□□□ 1.03
PRKCH-216ENST00000555542 HEXAP06865 529 aa21.48■■□□□ 1.03
PRKCH-216ENST00000555542 H2AFXP16104 143 aaPredicted RBP21.48■■□□□ 1.03
PRKCH-216ENST00000555542 GPX2P18283 190 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms