RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 USF3Q68DE3 2245 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 A0A1W2PP18 115 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 H7C1Q1 480 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 FRS3O43559 492 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 SOD3P08294 240 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 ITGA5P08648 1049 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 HOXC5Q00444 222 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 CDK6Q00534 326 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 GABRA6Q16445 453 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 REEP3Q6NUK4 255 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 ZIC4Q8N9L1 334 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 NFKBIDQ8NI38 313 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 STK35Q8TDR2 534 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 SMAP2Q8WU79 429 aaPredicted RBP17.12■□□□□ 0.33
CBLN3-202ENST00000555436 RSPO3Q9BXY4 272 aaPredicted RBP17.12■□□□□ 0.33
CBLN3-202ENST00000555436 IKZF5Q9H5V7 419 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 SLC7A10Q9NS82 523 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 ADPRHL2Q9NX46 363 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 UPB1Q9UBR1 384 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 DCTN4Q9UJW0 460 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 CORO2BQ9UQ03 480 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
CBLN3-202ENST00000555436 NIPBLQ6KC79 2804 aaeCLIP17.12■□□□□ 0.33
CBLN3-202ENST00000555436 OVOL3O00110 214 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 VAMP5O95183 116 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 GPX2P18283 190 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 P2RY4P51582 365 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 FOXG1P55316 489 aaPredicted RBP17.11■□□□□ 0.33
CBLN3-202ENST00000555436 ATP5J2P56134 94 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 TSPO2Q5TGU0 170 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 TMEM225Q6GV28 225 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 DHRS4L2Q6PKH6 230 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 DLEU7Q6UYE1 221 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 GPAT4Q86UL3 456 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 KRT73Q86Y46 540 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 CIARTQ8N365 385 aaPredicted RBP17.11■□□□□ 0.33
CBLN3-202ENST00000555436 OR52N5Q8NH56 324 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 ZNF385AQ96PM9 386 aaKnown RBP17.11■□□□□ 0.33
CBLN3-202ENST00000555436 SPATA5L1Q9BVQ7 753 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 AMBRA1Q9C0C7 1298 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 TMEM38AQ9H6F2 299 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.11■□□□□ 0.33
CBLN3-202ENST00000555436 CADP27708 2225 aa17.11■□□□□ 0.33
CBLN3-202ENST00000555436 TRIM64A6NGJ6 449 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 TRIM64BA6NI03 449 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 FAM171A2A8MVW0 826 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 EVPLLA8MZ36 301 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 SHISA9B4DS77 424 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 ABCD4O14678 606 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 AHSA1O95433 338 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 HOXB4P17483 251 aaPredicted RBP17.1■□□□□ 0.33
CBLN3-202ENST00000555436 PGGHGQ32M88 737 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 KRTAP21-3Q3LHN1 58 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 KLHL17Q6TDP4 642 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 C6orf89Q6UWU4 347 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 TMEM108Q6UXF1 575 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 CLEC9AQ6UXN8 241 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 AAED1Q7RTV5 226 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 C17orf78Q8N4C9 275 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 LSMEM1Q8N8F7 131 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 C1orf162Q8NEQ5 155 aaPredicted RBP17.1■□□□□ 0.33
CBLN3-202ENST00000555436 MFSD8Q8NHS3 518 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
CBLN3-202ENST00000555436 RADILQ96JH8 1075 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 ZNF385DQ9H6B1 395 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 C12orf10Q9HB07 376 aa17.1■□□□□ 0.33
CBLN3-202ENST00000555436 CISD1Q9NZ45 108 aaKnown RBP17.1■□□□□ 0.33
CBLN3-202ENST00000555436 MAGED1Q9Y5V3 778 aaPredicted RBP17.1■□□□□ 0.33
CBLN3-202ENST00000555436 ELOA3DA6NLF2 546 aaPredicted RBP17.09■□□□□ 0.33
CBLN3-202ENST00000555436 FTCDNL1E5RQL4 147 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 SLC6A2P23975 617 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 PTAFRP25105 342 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 MPGP29372 298 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 TGFBR3Q03167 851 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 EGR4Q05215 589 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 SCARB2Q14108 478 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 ADRM1Q16186 407 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 ELOA3BQ3SY89 546 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 C9orf135Q5VTT2 229 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 COMTD1Q86VU5 262 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 POMGNT2Q8NAT1 580 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 ELOA3Q8NG57 546 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 CPPED1Q9BRF8 314 aaPredicted RBP17.09■□□□□ 0.33
CBLN3-202ENST00000555436 PTDSS2Q9BVG9 487 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 SLCO5A1Q9H2Y9 848 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 RPS6KB2Q9UBS0 482 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 LEF1Q9UJU2 399 aaPredicted RBP17.09■□□□□ 0.33
CBLN3-202ENST00000555436 TRIM33Q9UPN9 1127 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 MGAT4BQ9UQ53 548 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 RASD1Q9Y272 281 aa17.09■□□□□ 0.33
CBLN3-202ENST00000555436 NAV3Q8IVL0 2385 aa17.08■□□□□ 0.33
CBLN3-202ENST00000555436 A0A1W2PR80 420 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 PRORSD1PA6NEY8 169 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 TPST1O60507 370 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 EDF1O60869 148 aaKnown RBP17.08■□□□□ 0.32
CBLN3-202ENST00000555436 HTR2AP28223 471 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 ZNF83P51522 516 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 CDH11P55287 796 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 LTBQ06643 244 aa17.08■□□□□ 0.32
CBLN3-202ENST00000555436 RUNDC3AQ59EK9 446 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms