RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MMP25Q9NPA2 562 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 CTPS2Q9NRF8 586 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 CNIH4Q9P003 139 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 ERVK-19Q9WJR5 959 aa15.86■□□□□ 0.13
SHOX-204ENST00000554971 RELNP78509 3460 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 CEACAM4O75871 244 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 IGHA1P01876 353 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 ITGB2P05107 769 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 SERPINA7P05543 415 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 LIMS3P0CW19 117 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 LIMS4P0CW20 117 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 NT5EP21589 574 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 SSTR4P31391 388 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 CCL11P51671 97 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 FUT7Q11130 342 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 ZNF267Q14586 743 aaPredicted RBP15.85■□□□□ 0.13
SHOX-204ENST00000554971 EXT1Q16394 746 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 DUSP5Q16690 384 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 LINC00303Q3SY05 128 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 CCBE1Q6UXH8 406 aaPredicted RBP15.85■□□□□ 0.13
SHOX-204ENST00000554971 ZNF836Q6ZNA1 936 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 GDPD3Q7L5L3 318 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 NRMQ8IXM6 262 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 SLC43A2Q8N370 569 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 FDCSPQ8NFU4 85 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 M1APQ8TC57 530 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 TTC9Q92623 222 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 HTRA1Q92743 480 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 THOC3Q96J01 351 aaKnown RBP15.85■□□□□ 0.13
SHOX-204ENST00000554971 PELOQ9BRX2 385 aaKnown RBP15.85■□□□□ 0.13
SHOX-204ENST00000554971 NUDT9Q9BW91 350 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 TMEM5Q9Y2B1 443 aa15.85■□□□□ 0.13
SHOX-204ENST00000554971 TMEM200CA6NKL6 621 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 A6NL46 340 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 RGS5O15539 181 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 AKAP8O43823 692 aaKnown RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 CDRT1O95170 752 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 CBX7O95931 251 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 NID1P14543 1247 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 CFL1P23528 166 aaKnown RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 PTBP1P26599 531 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHOX-204ENST00000554971 SLC1A3P43003 542 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 ZNF136P52737 540 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 SLC37A1P57057 533 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 MAP4K2Q12851 820 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 ZSWIM7Q19AV6 140 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 XKRXQ6PP77 449 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 HMGN2P46Q86SG4 172 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 VWA5B2Q8N398 1253 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 KLHL36Q8N4N3 616 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 GDPD1Q8N9F7 314 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 C7orf57Q8NEG2 295 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 ASB15Q8WXK1 588 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 V9GYH0 126 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 EML6Q6ZMW3 1958 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 RP1L1Q8IWN7 2480 aaPredicted RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 EXPH5Q8NEV8 1989 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 SEC14L5O43304 696 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 FRS3O43559 492 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 KCNK2O95069 426 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 HLA-DPB1P04440 258 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 ITGA3P26006 1051 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 MAP3K8P41279 467 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 CAPZA2P47755 286 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 EXOSC7Q15024 291 aaKnown RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 AKAP14Q86UN6 197 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 C9orf40Q8IXQ3 194 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 CDK20Q8IZL9 346 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 SIRT6Q8N6T7 355 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 ZNF615Q8N8J6 731 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 OR4Q3Q8NH05 313 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 HOXB13Q92826 284 aaPredicted RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 C1GALT1C1Q96EU7 318 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 TRMT61AQ96FX7 289 aaKnown RBP15.84■□□□□ 0.13
SHOX-204ENST00000554971 HS6ST2Q96MM7 605 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 DTX4Q9Y2E6 619 aa15.84■□□□□ 0.13
SHOX-204ENST00000554971 COL6A6A6NMZ7 2263 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 UNC119BA6NIH7 251 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 RCBTB2O95199 551 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 THY1P04216 161 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 ICAM2P13598 275 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 DCST2Q5T1A1 773 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 DDI2Q5TDH0 399 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 B3GNTL1Q67FW5 361 aaPredicted RBP15.83■□□□□ 0.12
SHOX-204ENST00000554971 DESI1Q6ICB0 168 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 H3F3CQ6NXT2 135 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 PCSK4Q6UW60 755 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 OR52L1Q8NGH7 329 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 GATAD2BQ8WXI9 593 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 TM9SF4Q92544 642 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 PRR14Q9BWN1 585 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 ZNF552Q9H707 407 aaPredicted RBP15.83■□□□□ 0.12
SHOX-204ENST00000554971 INPP5EQ9NRR6 644 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 SLC7A7Q9UM01 511 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 NBASA2RRP1 2371 aa15.83■□□□□ 0.12
SHOX-204ENST00000554971 TRBV11-1A0A0K0K1C0 115 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 WWP2O00308 870 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 CD53P19397 219 aa15.82■□□□□ 0.12
SHOX-204ENST00000554971 RNF144AP50876 292 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms