RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 RNF220Q5VTB9 566 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 PRAMEF8Q5VWM4 474 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 PRAMEF7Q5VXH5 474 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 WBP2NLQ6ICG8 309 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 ALKBH2Q6NS38 261 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF544Q6NX49 715 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.81□□□□□ -1.48
SLIRP-203ENST00000554074 MAVSQ7Z434 540 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 PRIMA1Q86XR5 153 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 CCDC103Q8IW40 242 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 MIER2Q8N344 545 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 POMGNT2Q8NAT1 580 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 OR52P1PQ8NH57 321 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF775Q96BV0 537 aaPredicted RBP5.81□□□□□ -1.48
SLIRP-203ENST00000554074 ADAD1Q96M93 576 aaKnown RBP5.81□□□□□ -1.48
SLIRP-203ENST00000554074 HS6ST2Q96MM7 605 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 DHRS9Q9BPW9 319 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 REG4Q9BYZ8 158 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 WDR55Q9H6Y2 383 aaPredicted RBP5.81□□□□□ -1.48
SLIRP-203ENST00000554074 RMND5AQ9H871 391 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 OBP2BQ9NPH6 170 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 CBLN4Q9NTU7 201 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 FGFR1OP2Q9NVK5 253 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 AMDHD2Q9Y303 409 aa5.81□□□□□ -1.48
SLIRP-203ENST00000554074 A0A0G2JND7 137 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 A0A0G2JPF8 293 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ZC3H12DA2A288 527 aaKnown RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 FAM234BA2RU67 622 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 OR6C65A6NJZ3 312 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 LIPT2A6NK58 231 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 AQP7P3A6NL99 342 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CCT8L1PA6NM43 557 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 A8MVM7 634 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 HNRNPCL2B2RXH8 293 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 HNRNPCL3B7ZW38 293 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 INAFM1C9JVW0 142 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 E7EQL1 145 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 RNF223E7ERA6 249 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 H7C417 338 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 TLX2O43763 284 aaPredicted RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 HNRNPCL1O60812 293 aaKnown RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CCDC22O60826 627 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 FZD7O75084 574 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 NPIPB7O75200 414 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CRLF1O75462 422 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 VAMP5O95183 116 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 IGHV3-9P01782 118 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 C1QCP02747 245 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 GSNP06396 782 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 TFPTP0C1Z6 253 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 HNRNPCL4P0DMR1 293 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 BMP2P12643 396 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CXCR1P25024 350 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 TTKP33981 857 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ACVR1BP36896 505 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CDKN1AP38936 164 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ACAA2P42765 397 aaKnown RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 NME5P56597 212 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 DSCR9P59020 149 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 DSTNP60981 165 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 COPZ1P61923 177 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 GNGT1P63211 74 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 FAPQ12884 760 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 FADDQ13158 208 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 LARS2Q15031 903 aaKnown RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 MAPRE2Q15555 327 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 OTUD3Q5T2D3 398 aaPredicted RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 C11orf71Q6IPW1 123 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SLC22A25Q6T423 547 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CASP12Q6UXS9 341 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF836Q6ZNA1 936 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ABHD12BQ7Z5M8 362 aaPredicted RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 CPLX4Q7Z7G2 160 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 HMGN2P46Q86SG4 172 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 DEPDC4Q8N2C3 294 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 WDR31Q8NA23 367 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 OR9K2Q8NGE7 335 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 OR52E4Q8NGH9 312 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 OR52N5Q8NH56 324 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SLC38A5Q8WUX1 472 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ITCHQ96J02 903 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SPATA9Q9BWV2 254 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 TAPBPLQ9BX59 468 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 KRTAP3-2Q9BYR7 98 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 RAD21L1Q9H4I0 556 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ARMC7Q9H6L4 198 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 FKRPQ9H9S5 495 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 TPT1P8Q9HAU6 139 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 C12orf10Q9HB07 376 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 MOV10Q9HCE1 1003 aaKnown RBP5.8□□□□□ -1.48
SLIRP-203ENST00000554074 BCL2L10Q9HD36 194 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 NPHS2Q9NP85 383 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SLC17A5Q9NRA2 495 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SLC7A10Q9NS82 523 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 SLC6A13Q9NSD5 602 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 UPB1Q9UBR1 384 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 POU2F3Q9UKI9 436 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF232Q9UNY5 417 aa5.8□□□□□ -1.48
SLIRP-203ENST00000554074 ZNF443Q9Y2A4 671 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms