RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ANKRA2Q9H9E1 313 aa14.5□□□□□ -0.09
ACTN1-209ENST00000553659 CLN6Q9NWW5 311 aa14.5□□□□□ -0.09
ACTN1-209ENST00000553659 DNAJB12Q9NXW2 375 aaKnown RBP14.5□□□□□ -0.09
ACTN1-209ENST00000553659 CNOT2Q9NZN8 540 aaKnown RBP14.5□□□□□ -0.09
ACTN1-209ENST00000553659 MPDZO75970 2070 aa14.5□□□□□ -0.09
ACTN1-209ENST00000553659 ITPR3Q14573 2671 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 MTORP42345 2549 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 CLCA1A8K7I4 914 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF99A8MXY4 864 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 FAM47E-STBD1D6RA91 191 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 PTGES3LE9PB15 166 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 HCN1O60741 890 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 WBP4O75554 376 aaKnown RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 CTAG2O75638 210 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 CELA3AP09093 270 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 CCL3P10147 92 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 GABRB1P18505 474 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 S1PR1P21453 382 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 EPHA2P29317 976 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ADH7P40394 386 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 PSPHP78330 225 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 LSAMPQ13449 338 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 EXOSC7Q15024 291 aaKnown RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 GPR68Q15743 365 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 SLC25A35Q3KQZ1 300 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 C1orf185Q5T7R7 199 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 C12orf73Q69YU5 71 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 XAF1Q6GPH4 301 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ARSKQ6UWY0 536 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF730Q6ZMV8 503 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 GRAMD2AQ8IUY3 354 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 RNF113BQ8IZP6 322 aaKnown RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 APH1BQ8WW43 257 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ISOC1Q96CN7 298 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 SLC41A3Q96GZ6 507 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 VSTM2LQ96N03 204 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 QRSL1Q9H0R6 528 aaKnown RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 RASSF1Q9NS23 344 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.49□□□□□ -0.09
ACTN1-209ENST00000553659 MAN2C1Q9NTJ4 1040 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 COPS7AQ9UBW8 275 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 REV1Q9UBZ9 1251 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 AKAP6Q13023 2319 aa14.49□□□□□ -0.09
ACTN1-209ENST00000553659 TRGV5A0A0B4J1U4 118 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 TRAPPC13A5PLN9 417 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 SNTNA6NMZ2 147 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 H3BN98 237 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 XPNPEP2O43895 674 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 TRMUO75648 421 aaKnown RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 KCNK2O95069 426 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 PIPP12273 146 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 POU2F1P14859 743 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 GABRA1P14867 456 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 PCMT1P22061 227 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 LCN1P31025 176 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 EMDP50402 254 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 TSPAN31Q12999 210 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 DYNC1I2Q13409 638 aaKnown RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF791Q3KP31 576 aaPredicted RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 FLYWCH1Q4VC44 716 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 TMEM201Q5SNT2 666 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 MEDAGQ5VYS4 303 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 SLC22A10Q63ZE4 541 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 GTF2IRD2BQ6EKJ0 949 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 RASSF6Q6ZTQ3 369 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 PTCHD4Q6ZW05 846 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 GTF2IRD2Q86UP8 949 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 COMTD1Q86VU5 262 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 TGIF2LYQ8IUE0 185 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 CLDN22Q8N7P3 220 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 OR8J1Q8NGP2 316 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 NUBPLQ8TB37 319 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 CNPPD1Q9BV87 410 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 POLDIP3Q9BY77 421 aaKnown RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 HOXD1Q9GZZ0 328 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 EXO5Q9H790 373 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 SLC25A19Q9HC21 320 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 SH2D2AQ9NP31 389 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 FKBP14Q9NWM8 211 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 ALKBH4Q9NXW9 302 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 PSORS1C1Q9UIG5 152 aa14.48□□□□□ -0.09
ACTN1-209ENST00000553659 MRTO4Q9UKD2 239 aaKnown RBP14.48□□□□□ -0.09
ACTN1-209ENST00000553659 A0A087WUU8 490 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 IRGMA1A4Y4 181 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 CDHR4A6H8M9 788 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 CPSF4LA6NMK7 179 aaKnown RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 HTR1AP08908 422 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ENDOUP21128 410 aaKnown RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 FPR3P25089 353 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 PEX19P40855 299 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 DCAF7P61962 342 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 PSG6Q00889 435 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF267Q14586 743 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 TBCEQ15813 527 aaPredicted RBP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.47□□□□□ -0.09
ACTN1-209ENST00000553659 TMEM44Q2T9K0 475 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 SLC25A30Q5SVS4 291 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 RIPPLY2Q5TAB7 128 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 ZNF613Q6PF04 617 aa14.47□□□□□ -0.09
ACTN1-209ENST00000553659 MBOAT2Q6ZWT7 520 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms