RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	ZBED6CL	Q96FA7	236 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	OTUB1	Q96FW1	271 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	C16orf58	Q96GQ5	468 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	METTL2A	Q96IZ6	378 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF681	Q96N22	645 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	AMDHD1	Q96NU7	426 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	CCT7	Q99832	543 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	FAM173A	Q9BQD7	235 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	DOHH	Q9BU89	302 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	ITPA	Q9BY32	194 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	AAMDC	Q9H7C9	122 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	VIPAS39	Q9H9C1	493 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	FOLH1B	Q9HBA9	442 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	SNTG1	Q9NSN8	517 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	C20orf141	Q9NUB4	165 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	ATAD3A	Q9NVI7	634 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	TMEM45A	Q9NWC5	275 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	TUBA8	Q9NY65	449 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	KLRF1	Q9NZS2	232 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	CNIH4	Q9P003	139 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	KIAA1456	Q9P272	454 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	MRTO4	Q9UKD2	239 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	ACAD8	Q9UKU7	415 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	FAF1	Q9UNN5	650 aa	Predicted RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	PPIE	Q9UNP9	301 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	EXO1	Q9UQ84	846 aa	Known RBP	4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	CCL27	Q9Y4X3	112 aa		4.25	□□□□□ -1.73
ATXN3-222	ENST00000553570	ICE1	Q9Y2F5	2266 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A0G2JMM0	328 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A1B0GTH9	108 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A1W2PPB8	328 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570		A0A1W2PRS3	328 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PINLYP	A6NC86	204 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	KIR3DP1	A8MWS1	328 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	IFNL4	K9M1U5	179 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	GTPBP1	O00178	669 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	UPK1A	O00322	258 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SDHD	O14521	159 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SCAMP2	O15127	329 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	UBD	O15205	165 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	POLR3G	O15318	223 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	HDAC3	O15379	428 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SCO2	O43819	266 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ICOSLG	O75144	302 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC22A3	O75751	556 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	CLPS	P04118	112 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	IGKV3-11	P04433	115 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ALOX5	P09917	674 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	HPGD	P15428	266 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	MAGEA5	P43359	124 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	TMED10	P49755	219 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	EMD	P50402	254 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	CDK9	P50750	372 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC18A1	P54219	525 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	AQP5	P55064	265 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	CLDN8	P56748	225 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	RPS3A	P61247	264 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	STX1B	P61266	288 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SRY	Q05066	204 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	STX5	Q13190	355 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	EBP	Q15125	230 aa	Known RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	DECR1	Q16698	335 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF791	Q3KP31	576 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	KRTCAP3	Q53RY4	240 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF628	Q5EBL2	1059 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	XKR7	Q5GH72	579 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ASPHD1	Q5U4P2	390 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ANXA8L1	Q5VT79	327 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	MORN5	Q5VZ52	161 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	CFAP161	Q6P656	301 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	RRM2B	Q7LG56	351 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	C6orf120	Q7Z4R8	191 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	IGFN1	Q86VF2	1251 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	GPALPP1	Q8IXQ4	340 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	CLECL1	Q8IZS7	167 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLC34A3	Q8N130	599 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF614	Q8N883	585 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	COX18	Q8N8Q8	333 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	POGLUT1	Q8NBL1	392 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	C11orf65	Q8NCR3	313 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR10Q1	Q8NGQ4	319 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR1J4	Q8NGS1	313 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	RAB3IL1	Q8TBN0	382 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ZNF675	Q8TD23	568 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR5P2	Q8WZ92	322 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PIK3R3	Q92569	461 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	NR4A3	Q92570	626 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	ADIPOR1	Q96A54	375 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	MTERF3	Q96E29	417 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PERP	Q96FX8	193 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	RMND5B	Q96G75	393 aa	Predicted RBP	4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SCMH1	Q96GD3	660 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	MAGEB18	Q96M61	343 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	COL21A1	Q96P44	957 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	OR52E6	Q96RD3	313 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	NODAL	Q96S42	347 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	PIP5K1A	Q99755	562 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	MEAF6	Q9HAF1	191 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SLCO1B3	Q9NPD5	702 aa		4.24	□□□□□ -1.73
ATXN3-222	ENST00000553570	SDHAF3	Q9NRP4	125 aa		4.24	□□□□□ -1.73

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