RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 TMEM45AQ9NWC5 275 aa11.46□□□□□ -0.57
NPAS3-209ENST00000551008 ZNF446Q9NWS9 450 aa11.46□□□□□ -0.57
NPAS3-209ENST00000551008 THUMPD1Q9NXG2 353 aaKnown RBP11.46□□□□□ -0.57
NPAS3-209ENST00000551008 SEC14L4Q9UDX3 406 aa11.46□□□□□ -0.57
NPAS3-209ENST00000551008 IFT52Q9Y366 437 aa11.46□□□□□ -0.57
NPAS3-209ENST00000551008 SLC25A15Q9Y619 301 aa11.46□□□□□ -0.57
NPAS3-209ENST00000551008 ANK3Q12955 4377 aaKnown RBP11.46□□□□□ -0.58
NPAS3-209ENST00000551008 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 A0A1W2PR80 420 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 TRIM64A6NGJ6 449 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 EIF1BO60739 113 aaKnown RBP11.45□□□□□ -0.58
NPAS3-209ENST00000551008 GGT1P19440 569 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 PCBP3P57721 371 aaKnown RBP11.45□□□□□ -0.58
NPAS3-209ENST00000551008 CDK6Q00534 326 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 LGALS3BPQ08380 585 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 FAPQ12884 760 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 PPA1Q15181 289 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 GABRA6Q16445 453 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF672Q499Z4 452 aaPredicted RBP11.45□□□□□ -0.58
NPAS3-209ENST00000551008 RUNDC3AQ59EK9 446 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 C1orf140Q5VVS0 124 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 CGB2Q6NT52 195 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 DHRS4L2Q6PKH6 230 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 PRSS57Q6UWY2 283 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 CASP12Q6UXS9 341 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 LINGO2Q7L985 606 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 YTHDF3Q7Z739 585 aaKnown RBP11.45□□□□□ -0.58
NPAS3-209ENST00000551008 P3H2Q8IVL5 708 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 DYDC1Q8WWB3 177 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 SLC35B4Q969S0 331 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 TMEM45BQ96B21 275 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 C18orf12Q96KH6 178 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 Q96MF0 132 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 MUS81Q96NY9 551 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 TMEM38AQ9H6F2 299 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 NPHS2Q9NP85 383 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 DCTN4Q9UJW0 460 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 PRDM4Q9UKN5 801 aa11.45□□□□□ -0.58
NPAS3-209ENST00000551008 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
NPAS3-209ENST00000551008 CHD3Q12873 2000 aaKnown RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 A0A1B0GWA3 101 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 A8MVM7 634 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 CLOCKO15516 846 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 MRPL33O75394 65 aaKnown RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 CD8AP01732 235 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 GPIP06744 558 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 CD3EP07766 207 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 UQCRBP14927 111 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 CXCR1P25024 350 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 PRKAR1BP31321 381 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 DMTNQ08495 405 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ZSWIM7Q19AV6 140 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 C9orf135Q5VTT2 229 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 REEP3Q6NUK4 255 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 B3GLCTQ6Y288 498 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 EPHX4Q8IUS5 362 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 DPP10Q8N608 796 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 OR52N5Q8NH56 324 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 STK35Q8TDR2 534 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 KTI12Q96EK9 354 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 USB1Q9BQ65 265 aaKnown RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ESRP2Q9H6T0 727 aaKnown RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ASB6Q9NWX5 421 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ADPRHL2Q9NX46 363 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 TAS2R16Q9NYV7 291 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 B3GAT1Q9P2W7 334 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 SLC9A8Q9Y2E8 581 aa11.44□□□□□ -0.58
NPAS3-209ENST00000551008 MAGED1Q9Y5V3 778 aaPredicted RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 SONP18583 2426 aaKnown RBP11.44□□□□□ -0.58
NPAS3-209ENST00000551008 ABCA1O95477 2261 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 H7C1Q1 480 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 FBP2O00757 339 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 INHBBP09529 407 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 PNMTP11086 282 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 NCF2P19878 526 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 PPIBP23284 216 aaKnown RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 AQP1P29972 269 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 GZMMP51124 257 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 CRYBA2P53672 197 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 MTPNP58546 118 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 IRX1P78414 480 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 SCARB2Q14108 478 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 Q71RC1 249 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 NET1Q7Z628 596 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 DHDDSQ86SQ9 333 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 TSPYL5Q86VY4 417 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 P2RY8Q86VZ1 359 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 WDFY1Q8IWB7 410 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 UBE2J2Q8N2K1 259 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 LSMEM1Q8N8F7 131 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 GPR32P1Q8NGA4 272 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 TMEM171Q8WVE6 324 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 ANKRD27Q96NW4 1050 aa11.43□□□□□ -0.58
NPAS3-209ENST00000551008 NAA11Q9BSU3 229 aaPredicted RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 SF3B5Q9BWJ5 86 aaKnown RBP11.43□□□□□ -0.58
NPAS3-209ENST00000551008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms