RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 CLECL1Q8IZS7 167 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 ZNF786Q8N393 782 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 ANKS4BQ8N8V4 417 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 EIF1ADQ8N9N8 165 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 OR4F15Q8NGB8 312 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 OR9K2Q8NGE7 335 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 ZFAND2BQ8WV99 257 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 BCL2L2Q92843 193 aaPredicted RBP8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 RAB8BQ92930 207 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 DNAJA3Q96EY1 480 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 AURKBQ96GD4 344 aaPredicted RBP8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 C16orf45Q96MC5 204 aaPredicted RBP8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 ZIM3Q96PE6 472 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 ZDHHC2Q9UIJ5 367 aa8.56□□□□□ -1.04
TRAFD1-207ENST00000550051 TMEM72A0PK05 275 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 ZC3H12DA2A288 527 aaKnown RBP8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 PRAMEF27A3QJZ7 478 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 LRP5LA4QPB2 252 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 AGAP5A6NIR3 686 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 OR6C65A6NJZ3 312 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 LIPT2A6NK58 231 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 CLDN24A6NM45 220 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 GPIP06744 558 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 DAOP14920 347 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 ARRB2P32121 409 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 KHKP50053 298 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 NAAAQ02083 359 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 FUT5Q11128 374 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 RIN1Q13671 783 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 CARTPTQ16568 116 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 TBRG1Q3YBR2 411 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 OTUD3Q5T2D3 398 aaPredicted RBP8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 SAXO2Q658L1 398 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 TMEM225Q6GV28 225 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 OR4F3Q6IEY1 312 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 DEF8Q6ZN54 512 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 C4orf33Q8N1A6 199 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 TMEM99Q8N816 258 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 VPS37AQ8NEZ2 397 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 OR1K1Q8NGR3 316 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 TUBGCP3Q96CW5 907 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 NEURL3Q96EH8 262 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 ZNF385AQ96PM9 386 aaKnown RBP8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 KCNS3Q9BQ31 491 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 ZNF442Q9H7R0 627 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 MTHFD2LQ9H903 347 aaPredicted RBP8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 NOP53Q9NZM5 478 aaKnown RBP8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 PCDHB14Q9Y5E9 798 aa8.55□□□□□ -1.04
TRAFD1-207ENST00000550051 TMEM129A0AVI4 362 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 AQP7P3A6NL99 342 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 AP3D1O14617 1153 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 SNUPNO95149 360 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 AKR7A3O95154 331 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 VAMP5O95183 116 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 IGKV3-15P01624 115 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 ERCC1P07992 297 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CBR1P16152 277 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 ITGA2P17301 1181 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CDH2P19022 906 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 PCMT1P22061 227 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CFPP27918 469 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 SRP14P37108 136 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 P2RY4P51582 365 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 DVL1P1P54792 670 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CDH15P55291 814 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 UBE2NP61088 152 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 HGFACQ04756 655 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CEACAM7Q14002 265 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CASP8Q14790 479 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 GPAT3Q53EU6 434 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 ANXA8L1Q5VT79 327 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 TNFAIP8L2Q6P589 184 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 C12orf54Q6X4T0 127 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 ZCCHC23Q6ZST2 131 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CREB3L2Q70SY1 520 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 IL17RDQ8NFM7 739 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 OR4A15Q8NGL6 344 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 AGR3Q8TD06 166 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 TESCQ96BS2 214 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 TRNT1Q96Q11 434 aaKnown RBP8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 MECRQ9BV79 373 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 PLA2G12AQ9BZM1 189 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 LINC00470Q9BZP3 86 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 SLC38A1Q9H2H9 487 aa8.54□□□□□ -1.04
TRAFD1-207ENST00000550051 CFAP73A6NFT4 308 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 TMEM229AB2RXF0 380 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 ZNF587BE7ETH6 402 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 RPL36A-HNRNPH2H7BZ11 118 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 HMGN4O00479 90 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 WIPF1O43516 503 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 SPRY1O43609 319 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 KRT33AO76009 404 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 LGI1O95970 557 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 IGFBP1P08833 259 aaPredicted RBP8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 NUDT17P0C025 328 aa8.53□□□□□ -1.04
TRAFD1-207ENST00000550051 CECR9P0C854 216 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms