RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 AMDHD2Q9Y303 409 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 YLPM1P49750 1951 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 IGHV4-30-2A0A087WSY4 118 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 SSX4O60224 188 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 AKR7A3O95154 331 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 PRG2P13727 222 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 CRATP43155 626 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 P2RY4P51582 365 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 ATG16L1Q676U5 607 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 WBP2NLQ6ICG8 309 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 MUC15Q8N387 334 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 CADM2Q8N3J6 435 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 SF3B5Q9BWJ5 86 aaKnown RBP15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 C1QTNF6Q9BXI9 259 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 CALML5Q9NZT1 146 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 UPB1Q9UBR1 384 aa15.24■□□□□ 0.03
CHMP1A-205ENST00000548650 TMEM229AB2RXF0 380 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 CD5LO43866 347 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 CXCR1P25024 350 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 MPGP29372 298 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 NUDT6P53370 316 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 BNIP2Q12982 314 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 ZNF544Q6NX49 715 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 FBXL14Q8N1E6 418 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 CLIP4Q8N3C7 705 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 HTRA1Q92743 480 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 C3orf49Q96BT1 292 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 TLCD1Q96CP7 247 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 ITCHQ96J02 903 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 ADAD1Q96M93 576 aaKnown RBP15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 RMND5AQ9H871 391 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 MANSC1Q9H8J5 431 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 PRDM4Q9UKN5 801 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 RTTNQ86VV8 2226 aa15.23■□□□□ 0.03
CHMP1A-205ENST00000548650 A8MVM7 634 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 ATP6V1G2-DDX39BF2Z307 99 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 H7C417 338 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 NPIPB7O75200 414 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 ANP32DO95626 131 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 TP53P04637 393 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 HOXB9P17482 250 aaPredicted RBP15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 POLR2JP52435 117 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 MAGOHP61326 146 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 COPZ1P61923 177 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 TGFBR3Q03167 851 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 LARS2Q15031 903 aaKnown RBP15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 C6orf10Q5SRN2 563 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 C1QTNF12Q5T7M4 302 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 C1orf140Q5VVS0 124 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 AAED1Q7RTV5 226 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 SERPINA11Q86U17 422 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 GPAT4Q86UL3 456 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 POMGNT2Q8NAT1 580 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 OR10H5Q8NGA6 315 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 BOD1Q96IK1 185 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 SPATA9Q9BWV2 254 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 PIF1Q9H611 641 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 ADPRHL2Q9NX46 363 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 NKIRAS1Q9NYS0 192 aa15.22■□□□□ 0.03
CHMP1A-205ENST00000548650 FBN1P35555 2871 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 A0A096LPI6 279 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 UBDO15205 165 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 TLX2O43763 284 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 NUDT7P0C024 238 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 FABP6P51161 128 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 LGALS3BPQ08380 585 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 ZSWIM7Q19AV6 140 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 HIKESHIQ53FT3 197 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 DEPDC4Q8N2C3 294 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 MIER2Q8N344 545 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 GTF2H4Q92759 462 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 ALKBH3Q96Q83 286 aaPredicted RBP15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 RHNO1Q9BSD3 238 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 TAPBPLQ9BX59 468 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 PAIP1Q9H074 479 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 THUMPD1Q9NXG2 353 aaKnown RBP15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 MXRA5Q9NR99 2828 aa15.21■□□□□ 0.03
CHMP1A-205ENST00000548650 STAB1Q9NY15 2570 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 A0A0G2JPF8 293 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 HNRNPCL2B2RXH8 293 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 HNRNPCL3B7ZW38 293 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 FTCDNL1E5RQL4 147 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 KLF11O14901 512 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 HNRNPCL1O60812 293 aaKnown RBP15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 HNRNPCL4P0DMR1 293 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 BMP2P12643 396 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 NCF2P19878 526 aaPredicted RBP15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 SELENOPP49908 381 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 PRPS1P60891 318 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 SLC2A7Q6PXP3 512 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 KLHL24Q6TFL4 600 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 CLEC2AQ6UVW9 174 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 ZNF525Q8N782 197 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 MAL2Q969L2 176 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 PTDSS2Q9BVG9 487 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 FKRPQ9H9S5 495 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 BCL2L10Q9HD36 194 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 A4GALTQ9NPC4 353 aa15.2■□□□□ 0.02
CHMP1A-205ENST00000548650 PCDHB14Q9Y5E9 798 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms