RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PRRC2BQ5JSZ5 2229 aaKnown RBP3.07□□□□□ -1.92
PTCH1-216ENST00000548379 PIEZO1Q92508 2521 aa3.07□□□□□ -1.92
PTCH1-216ENST00000548379 A0A1B0GUA9 196 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 TMEM150BA6NC51 233 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 FRG2CA6NGY1 282 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 LRRIQ4A6NIV6 560 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 EFCAB7A8K855 629 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 PPIAL4DF5H284 164 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 NUDT21O43809 227 aaKnown RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 RHOBTB1O94844 696 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 DUSP14O95147 198 aaKnown RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 DEXIO95424 95 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 TDP2O95551 362 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ANP32DO95626 131 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 CSF2P04141 144 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 PCCBP05166 539 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 TPM2P07951 284 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF806P0C7X5 589 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 EPB41P11171 864 aaKnown RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 PGAM2P15259 253 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ACVR1BP36896 505 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 PRPHP41219 470 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 XCR1P46094 333 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 NOVA1P51513 510 aaKnown RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ARFIP1P53367 373 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 OSTNP61366 133 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 MAPK6Q16659 721 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 SLC36A3Q495N2 470 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 FAM78AQ5JUQ0 283 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 RABGAP1LQ5R372 815 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ATAD3CQ5T2N8 411 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 SPINK14Q6IE38 97 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 UFSP1Q6NVU6 142 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 BLOC1S2Q6QNY1 142 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 BLIDQ8IZY5 108 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 CCDC26Q8TAB7 109 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF461Q8TAF7 563 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 M1APQ8TC57 530 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 SMARCD2Q92925 531 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 AKR1E2Q96JD6 320 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 TCEANC2Q96MN5 208 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 CDK5RAP2Q96SN8 1893 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 NFKBIZQ9BYH8 718 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 RAB33BQ9H082 229 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 NXF3Q9H4D5 531 aaKnown RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 MEAF6Q9HAF1 191 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 RPS10P5Q9NQ39 176 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 EXTL2Q9UBQ6 330 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 SLC2A6Q9UGQ3 507 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 ZNF107Q9UII5 783 aaPredicted RBP3.06□□□□□ -1.92
PTCH1-216ENST00000548379 GSTK1Q9Y2Q3 226 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 NAALAD2Q9Y3Q0 740 aa3.06□□□□□ -1.92
PTCH1-216ENST00000548379 MUC6Q6W4X9 2439 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 COL11A1P12107 1806 aaPredicted RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PHLPP2Q6ZVD8 1323 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 IGKV3D-20A0A0C4DH25 116 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 FAM74A7A6NL05 159 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 B4GALT5O43286 388 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TBX19O60806 448 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 NEBLO76041 1014 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 THY1P04216 161 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 HBQ1P09105 142 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SLC35E2P0CK97 266 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 CPN1P15169 458 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TBXA2RP21731 343 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 HOXA6P31267 233 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 IL2RGP31785 369 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 OTX2P32243 289 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 FNTAP49354 379 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 LRRC74AQ0VAA2 488 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TWF1Q12792 350 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SNTB2Q13425 540 aaKnown RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PEX6Q13608 980 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SLC1A5Q15758 541 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 KRTAP27-1Q3LI81 207 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 NADK2Q4G0N4 442 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 FAM74A3Q4VXF1 159 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PAN3Q58A45 887 aaKnown RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 OLFML2AQ68BL7 652 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TPGS2Q68CL5 300 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 SLC8B1Q6J4K2 584 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PYHIN1Q6K0P9 492 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 C2orf66Q6UXQ4 117 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TMEM110Q86TL2 294 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 CDR2LQ86X02 465 aaPredicted RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 RALGPS2Q86X27 583 aaPredicted RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 HPS6Q86YV9 775 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 ZDHHC21Q8IVQ6 265 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 MFSD6LQ8IWD5 586 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 LYG1Q8N1E2 194 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 CSNK1A1LQ8N752 337 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 ZSCAN4Q8NAM6 433 aaPredicted RBP3.05□□□□□ -1.92
PTCH1-216ENST00000548379 ERMNQ8TAM6 284 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 MRAPQ8TCY5 172 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 IFT74Q96LB3 600 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TXN2Q99757 166 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 TCHPQ9BT92 498 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 PAXXQ9BUH6 204 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 EDEM2Q9BV94 578 aa3.05□□□□□ -1.92
PTCH1-216ENST00000548379 CCDC94Q9BW85 323 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms