RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 NUDT21O43809 227 aaKnown RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SSX4O60224 188 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 IGHG1P01857 330 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 CD1EP15812 388 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 NAGAP17050 411 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 PTGER1P34995 402 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 DRD3P35462 400 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 FRKP42685 505 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 C17orf67Q0P5P2 114 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SPATS1Q496A3 300 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 C17orf107Q6ZR85 190 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 PELI3Q8N2H9 469 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF619Q8N2I2 560 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 LHFPL5Q8TAF8 219 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 APIPQ96GX9 242 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 DPH2Q9BQC3 489 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 OR10A5Q9H207 317 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 OR10A2Q9H208 303 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF71Q9NQZ8 489 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 CCM2LQ9NUG4 571 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 TMEM181Q9P2C4 612 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SCP2D1Q9UJQ7 156 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SDHDO14521 159 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 PHYHO14832 338 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 NPR2P20594 1047 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 LAIR1Q6GTX8 287 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 XKRXQ6PP77 449 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 MAVSQ7Z434 540 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 CLEC14AQ86T13 490 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 OR51L1Q8NGJ5 315 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 CCL4L1Q8NHW4 92 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 ASB11Q8WXH4 323 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 C3orf49Q96BT1 292 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 PIP5K1AQ99755 562 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SMOC1Q9H4F8 434 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 FKRPQ9H9S5 495 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 HAO2Q9NYQ3 351 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 NOTCH2Q04721 2471 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 HTTP42858 3142 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 TRAV17A0A0B4J275 112 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 RAD1O60671 282 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 DBHP09172 617 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 FCGR2AP12318 317 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 SSTR2P30874 369 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 ADH7P40394 386 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 RBM34P42696 430 aaKnown RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 DCDC1P59894 354 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 CDC20Q12834 499 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 C9orf152Q5JTZ5 239 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 FAM219BQ5XKK7 198 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 TMPRSS12Q86WS5 348 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 WFDC8Q8IUA0 241 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 OR4K5Q8NGD3 323 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 OR13C3Q8NGS6 347 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 COQ10AQ96MF6 247 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 TAAR9Q96RI9 348 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 WACQ9BTA9 647 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 P2RY12Q9H244 342 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 C12orf49Q9H741 205 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 PRMT8Q9NR22 394 aaPredicted RBP7.98□□□□□ -1.13
CLIP1-218ENST00000545889 GSKIPQ9P0R6 139 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 LHX6Q9UPM6 363 aa7.98□□□□□ -1.13
CLIP1-218ENST00000545889 ACOT8O14734 319 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 DPM1O60762 260 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ATG12O94817 140 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLITRK5O94991 958 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ABHD16AO95870 558 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 DDOSTP39656 456 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 RAD52P43351 418 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 RORCP51449 518 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 S100A10P60903 97 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ERVK-16P61578 105 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 UGT8Q16880 541 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 DCST2Q5T1A1 773 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF425Q6IV72 752 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 PATE1Q8WXA2 126 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLC41A3Q96GZ6 507 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SORT1Q99523 831 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 NUDT22Q9BRQ3 303 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 MND1Q9BWT6 205 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 OR14J1Q9UGF5 321 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SLC23A2Q9UGH3 650 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 UBQLN2Q9UHD9 624 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF451Q9Y4E5 1061 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 GREB1Q4ZG55 1949 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 IGHV3-20A0A0C4DH32 117 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 TRBV2A0A0J9YWF9 115 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 SMIM30A4D0T7 59 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ZNF587BE7ETH6 402 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ITGB2P05107 769 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CRHBPP24387 322 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CA5AP35218 305 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 KIR2DL1P43626 348 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 KCNAB2Q13303 367 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 USF2Q15853 346 aaPredicted RBP7.97□□□□□ -1.13
CLIP1-218ENST00000545889 ACBD7Q8N6N7 88 aa7.97□□□□□ -1.13
CLIP1-218ENST00000545889 CASTOR1Q8WTX7 329 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms