RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 TRBV5-4A0A0C4DH59 114 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 FAM230AA0A1W2PPH8 454 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 THBS1P07996 1170 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PRKACBP22694 351 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TUBG1P23258 451 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 CASP6P55212 293 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 SMCO3A2RU48 225 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 B4DXG7 233 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 CER1O95813 267 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 CRYZL1O95825 349 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 POU3F2P20265 443 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 EFNA3P52797 238 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 C18orf63Q68DL7 685 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 RTN4RL1Q86UN2 441 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 SERPINA12Q8IW75 414 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 RCBTB1Q8NDN9 531 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 LILRB4Q8NHJ6 448 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 NXPE3Q969Y0 559 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PDXPQ96GD0 296 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TXNDC15Q96J42 360 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TNFRSF13CQ96RJ3 184 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 NPFFR2Q9Y5X5 522 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 A0A1B0GWA3 101 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 ICAM2P13598 275 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PPP3CBP16298 524 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 CST9Q5W186 159 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 ELP2Q6IA86 826 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 SLC16A9Q7RTY1 509 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PPP1R3BQ86XI6 285 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 MMP21Q8N119 569 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF611Q8N823 705 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 GHSRQ92847 366 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PPA2Q9H2U2 334 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 DUSP22Q9NRW4 184 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PTRH2Q9Y3E5 179 aaKnown RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 WIF1Q9Y5W5 379 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 GLI3P10071 1580 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 C1orf196B1AJZ1 125 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 PLPP1O14494 284 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 YKT6O15498 198 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 LGI1O95970 557 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 MT-ATP6P00846 226 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TACR3P29371 465 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 SLC35A2P78381 396 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 POU3F1Q03052 451 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 NICN1Q9BSH3 213 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 CDCA4Q9BXL8 241 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 MKRN2Q9H000 416 aaKnown RBP11.62□□□□□ -0.55
COL4A6-209ENST00000545689 METTL9Q9H1A3 318 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 R3HDMLQ9H3Y0 253 aa11.62□□□□□ -0.55
COL4A6-209ENST00000545689 TARM1B6A8C7 271 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 HCRTR1O43613 425 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 MT-CO2P00403 227 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 IFNA17P01571 189 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PTPN6P29350 595 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PTGER1P34995 402 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RRAS2P62070 204 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 BPIFB2Q8N4F0 458 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 WFDC5Q8TCV5 224 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 SNX18Q96RF0 628 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 C1orf198Q9H425 327 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 hCG_1807616A0A1W2PRN6 198 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF593O00488 134 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 NCR1O76036 304 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 GDNFP39905 211 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 CXCL12P48061 93 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 SLC35A1P78382 337 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 KCNJ8Q15842 424 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 LYSMD2Q8IV50 215 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 NKAIN3Q8N8D7 197 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 OR1S1Q8NH92 325 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 TOMM40LQ969M1 308 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF285Q96NJ3 590 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 OR5M11Q96RB7 305 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PFDN5Q99471 154 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 PRDM9Q9NQV7 894 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 B3GALT1Q9Y5Z6 326 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 UTS2O95399 124 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 SERPINE2P07093 398 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 CD53P19397 219 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 HTR2CP28335 458 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 BDKRB2P30411 391 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 LBX1P52954 281 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 BTG1P62324 171 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RPL23AP62750 156 aaKnown RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ADPRMQ3LIE5 342 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 RIMKLAQ8IXN7 391 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 REV1Q9UBZ9 1251 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 HEMK1Q9Y5R4 338 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 GPR137BO60478 399 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 POU3F3P20264 500 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 CX3CR1P49238 355 aa11.61□□□□□ -0.55
COL4A6-209ENST00000545689 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
COL4A6-209ENST00000545689 ARHGAP11BQ3KRB8 267 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms