RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 STX1BP61266 288 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 COPZ1P61923 177 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 TNK1Q13470 666 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 CLEC12BQ2HXU8 276 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 PRAMEF8Q5VWM4 474 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 PRAMEF7Q5VXH5 474 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 B3GLCTQ6Y288 498 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 WDR31Q8NA23 367 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 BBS10Q8TAM1 723 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 GTPBP3Q969Y2 492 aaKnown RBP18.55■□□□□ 0.56
SCARB1-210ENST00000545493 MUS81Q96NY9 551 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 SLC52A3Q9NQ40 469 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 SLAMF8Q9P0V8 285 aa18.55■□□□□ 0.56
SCARB1-210ENST00000545493 CR1P17927 2039 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 CSPG4Q6UVK1 2322 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 TMEM247A6NEH6 219 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 A8MVM7 634 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 NR5A2O00482 541 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 NDUFS7O75251 213 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 NCF2P19878 526 aaPredicted RBP18.54■□□□□ 0.56
SCARB1-210ENST00000545493 CD40P25942 277 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 HOXC5Q00444 222 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 KRTAP1-1Q07627 177 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 VEZF1Q14119 521 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 ZSWIM7Q19AV6 140 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 ZNF311Q5JNZ3 666 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 COMTD1Q86VU5 262 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 PIAS4Q8N2W9 510 aaPredicted RBP18.54■□□□□ 0.56
SCARB1-210ENST00000545493 GOLGA6L1Q8N7Z2 621 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 C1orf162Q8NEQ5 155 aaPredicted RBP18.54■□□□□ 0.56
SCARB1-210ENST00000545493 ATP6V1G3Q96LB4 118 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 SF3B5Q9BWJ5 86 aaKnown RBP18.54■□□□□ 0.56
SCARB1-210ENST00000545493 RAD21L1Q9H4I0 556 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 ADPRHL2Q9NX46 363 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 IFT52Q9Y366 437 aa18.54■□□□□ 0.56
SCARB1-210ENST00000545493 TRBV5-3A0A0A0MS03 114 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 E7EQL1 145 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 TGDSO95455 350 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 ARAFP10398 606 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 PTNP21246 168 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 ETFDHQ16134 617 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 PAGE3Q5JUK9 113 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 C1orf140Q5VVS0 124 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 OR7E24Q6IFN5 339 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 BLOC1S3Q6QNY0 202 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 TMEM108Q6UXF1 575 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 GPAT4Q86UL3 456 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 C17orf78Q8N4C9 275 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 SPDL1Q96EA4 605 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 TRMT61AQ96FX7 289 aaKnown RBP18.53■□□□□ 0.56
SCARB1-210ENST00000545493 CCDC28BQ9BUN5 200 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 PTDSS2Q9BVG9 487 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 SLCO5A1Q9H2Y9 848 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 ALG2Q9H553 416 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 CACYBPQ9HB71 228 aaKnown RBP18.53■□□□□ 0.56
SCARB1-210ENST00000545493 SLC17A5Q9NRA2 495 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 PARPBPQ9NWS1 579 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 CCDC167Q9P0B6 97 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 UPB1Q9UBR1 384 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 GDF2Q9UK05 429 aaPredicted RBP18.53■□□□□ 0.56
SCARB1-210ENST00000545493 PRDM4Q9UKN5 801 aa18.53■□□□□ 0.56
SCARB1-210ENST00000545493 ABCA2Q9BZC7 2435 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 FTCDNL1E5RQL4 147 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 M0R1B8 84 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 PTAFRP25105 342 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 PCSK6P29122 969 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 ACVR1BP36896 505 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 AQP5P55064 265 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 EGR4Q05215 589 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 GCNT6Q5T4J0 391 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 C11orf71Q6IPW1 123 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 DNM1P46Q6ZS02 220 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 MAPK1IP1LQ8NDC0 245 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 NFKBIDQ8NI38 313 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 SLC35B4Q969S0 331 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 RADILQ96JH8 1075 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 TAPBPLQ9BX59 468 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 GRIP2Q9C0E4 1043 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 IKZF5Q9H5V7 419 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 FAIMQ9NVQ4 179 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 VAPAQ9P0L0 249 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 MGAT4BQ9UQ53 548 aa18.52■□□□□ 0.56
SCARB1-210ENST00000545493 HIVEP2P31629 2446 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 INAFM1C9JVW0 142 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 FZD7O75084 574 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 HTR2AP28223 471 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 MPGP29372 298 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 LGALS3BPQ08380 585 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 SLC22A25Q6T423 547 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 KLHL17Q6TDP4 642 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 AAED1Q7RTV5 226 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 STK35Q8TDR2 534 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 ALKBH3Q96Q83 286 aaPredicted RBP18.51■□□□□ 0.55
SCARB1-210ENST00000545493 PIF1Q9H611 641 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 ZNF232Q9UNY5 417 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 AMDHD2Q9Y303 409 aa18.51■□□□□ 0.55
SCARB1-210ENST00000545493 C5orf58C9J3I9 102 aa18.5■□□□□ 0.55
SCARB1-210ENST00000545493 RNF223E7ERA6 249 aa18.5■□□□□ 0.55
SCARB1-210ENST00000545493 PNMTP11086 282 aa18.5■□□□□ 0.55
SCARB1-210ENST00000545493 PRKAR1BP31321 381 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms