RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 LGI1O95970 557 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 GAAP10253 952 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 EPHA1P21709 976 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 TMEM33P57088 247 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 UBE2NP61088 152 aaKnown RBP12.69□□□□□ -0.38
RTN3-214ENST00000545432 KCNJ10P78508 379 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 MRPS11P82912 194 aaKnown RBP12.69□□□□□ -0.38
RTN3-214ENST00000545432 DEFA6Q01524 100 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 SPDYE7PQ495Y7 208 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 CFAP157Q5JU67 520 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 VHLLQ6RSH7 139 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 SPATA21Q7Z572 469 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 MYPOPQ86VE0 399 aaPredicted RBP12.69□□□□□ -0.38
RTN3-214ENST00000545432 CARM1Q86X55 608 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 CDK20Q8IZL9 346 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 LRRC17Q8N6Y2 441 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 ZDHHC22Q8N966 263 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 CKAP2Q8WWK9 683 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 LINC00470Q9BZP3 86 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 ESM1Q9NQ30 184 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
RTN3-214ENST00000545432 TRAV20A0A0B4J274 112 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 GLRA3O75311 464 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 VAMP5O95183 116 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 ADRA2AP08913 450 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 CDH2P19022 906 aaPredicted RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 COL8A2P25067 703 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 RYKP34925 604 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 IDH2P48735 452 aaKnown RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 POLR2HP52434 150 aaKnown RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 RPS26P62854 115 aaKnown RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 OCLNQ16625 522 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 MSMPQ1L6U9 139 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 CCDC153Q494R4 210 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 OTUD3Q5T2D3 398 aaPredicted RBP12.68□□□□□ -0.38
RTN3-214ENST00000545432 FRRS1Q6ZNA5 592 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 IL17RDQ8NFM7 739 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 OR5AK3PQ8NH89 298 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 LRRC37BQ96QE4 947 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 EXD2Q9NVH0 621 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 PYCARDQ9ULZ3 195 aa12.68□□□□□ -0.38
RTN3-214ENST00000545432 CMYA5Q8N3K9 4069 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 ZNF587BE7ETH6 402 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 WNT9BO14905 357 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 AGR2O95994 175 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PNPP00491 289 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 HKR1P10072 659 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PRPS1L1P21108 318 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 ACHEP22303 614 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 MAPK1P28482 360 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 TACR3P29371 465 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 GPR6P46095 362 aaPredicted RBP12.67□□□□□ -0.38
RTN3-214ENST00000545432 SELENOPP49908 381 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
RTN3-214ENST00000545432 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 FUT5Q11128 374 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PTGR1Q14914 329 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 GALNTL6Q49A17 601 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 ATP6AP1LQ52LC2 224 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 CREB3L2Q70SY1 520 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 CMIPQ8IY22 773 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 ARFGAP2Q8N6H7 521 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 OR51F2Q8NH61 342 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 RDH5Q92781 318 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PPP3R2Q96LZ3 170 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PRPF18Q99633 342 aaKnown RBP12.67□□□□□ -0.38
RTN3-214ENST00000545432 SUCNR1Q9BXA5 334 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 MS4A5Q9H3V2 200 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.67□□□□□ -0.38
RTN3-214ENST00000545432 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 PCDHGB1Q9Y5G3 927 aa12.67□□□□□ -0.38
RTN3-214ENST00000545432 A0A1W2PPM1 405 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 SH3PXD2BA1X283 911 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 PRAMEF27A3QJZ7 478 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CLDN24A6NM45 220 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 SYNGR3O43761 229 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 SCN2BO60939 215 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 UPK3AO75631 287 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 AKR7A3O95154 331 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CHEK2O96017 543 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 HPXP02790 462 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 GPIP06744 558 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CELA3BP08861 270 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CPA3P15088 417 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CREB1P16220 341 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CCNA2P20248 432 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 NR4A1P22736 598 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CASQ1P31415 396 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 CRHR1P34998 444 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 ARR3P36575 388 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 TUBA1BP68363 451 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 TUBA4AP68366 448 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 FOXL1Q12952 345 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 C6orf136Q5SQH8 315 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 TUBA1AQ71U36 451 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 EPHX4Q8IUS5 362 aa12.66□□□□□ -0.38
RTN3-214ENST00000545432 RIBC1Q8N443 379 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms