RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 BCL2A1Q16548 175 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 ZSCAN26Q16670 478 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 ENTPD8Q5MY95 495 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 WBP2NLQ6ICG8 309 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 VWA1Q6PCB0 445 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 GRINAQ7Z429 371 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 TSPYL5Q86VY4 417 aaPredicted RBP11.14□□□□□ -0.63
ACTN1-206ENST00000544964 UBQLNLQ8IYU4 475 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
ACTN1-206ENST00000544964 STARD4Q96DR4 205 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 PYURFQ96I23 114 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 TRIM2Q9C040 744 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 AMBRA1Q9C0C7 1298 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 EVA1AQ9H8M9 152 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 TMEM27Q9HBJ8 222 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 OSGIN1Q9UJX0 560 aa11.14□□□□□ -0.63
ACTN1-206ENST00000544964 TMED7-TICAM2A0A0A6YYA0 188 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 TMEM72A0PK05 275 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SLC22A20A6NK97 555 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 DEFB108AA8MXU0 73 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 hCG_2039718K7EN88 272 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 MSTNO14793 375 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SEC14L5O43304 696 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 IFNW1P05000 195 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 ADH6P28332 368 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SHC1P29353 583 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SFTPDP35247 375 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 PCYT1AP49585 367 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 POLR2HP52434 150 aaKnown RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SUCLG1P53597 346 aaKnown RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 CLDN20P56880 219 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 FAM27E3Q08E93 113 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 FLOT2Q14254 428 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 ADGRG3Q86Y34 549 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 LILRA2Q8N149 483 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 LSMEM1Q8N8F7 131 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 GEMIN6Q8WXD5 167 aaKnown RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 C3orf49Q96BT1 292 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 DNAJA3Q96EY1 480 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SEPHS2Q99611 448 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 ADAM19Q9H013 955 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 C6orf203Q9P0P8 240 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-206ENST00000544964 TMED7Q9Y3B3 224 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 USF3Q68DE3 2245 aa11.13□□□□□ -0.63
ACTN1-206ENST00000544964 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 ERICH4A6NGS2 130 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 LINC01387J3KSC0 135 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 J3KTA2 159 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 FMO6PO60774 539 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 THY1P04216 161 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 CRHP06850 196 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 PTNP21246 168 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 CXCR1P25024 350 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 ELK4P28324 431 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 APOBEC1P41238 236 aaKnown RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 KIR2DL2P43627 348 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 HTR3AP46098 478 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 CDH12P55289 794 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 RAC1P63000 192 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 PIN1Q13526 163 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 MTX3Q5HYI7 312 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 ALG10BQ5I7T1 473 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 BTLAQ7Z6A9 289 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 TSEN54Q7Z6J9 526 aaKnown RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 BIVMQ86UB2 503 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 SPATA24Q86W54 205 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 SLC47A1Q96FL8 570 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 TRIM15Q9C019 465 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 OPN3Q9H1Y3 402 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-206ENST00000544964 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 AP4B1Q9Y6B7 739 aa11.12□□□□□ -0.63
ACTN1-206ENST00000544964 HIVEP2P31629 2446 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 A0A0J9YW62 118 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 A0A1B0GX12 115 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 A0A1W2PNR3 127 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 TRAPPC13A5PLN9 417 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 ELOA3DA6NLF2 546 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-206ENST00000544964 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
ACTN1-206ENST00000544964 CIB2O75838 187 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 SMNDC1O75940 238 aaKnown RBP eCLIP11.11□□□□□ -0.63
ACTN1-206ENST00000544964 DIRAS1O95057 198 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 LYPD3O95274 346 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 CGAP01215 116 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 SEMG1P04279 462 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 TFPIP10646 304 aa11.11□□□□□ -0.63
ACTN1-206ENST00000544964 LOXP28300 417 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms