RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 GNPDA2Q8TDQ7 276 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 RGMAQ96B86 450 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF354BQ96LW1 612 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TSSK6Q9BXA6 273 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 POLDIP3Q9BY77 421 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SPRTNQ9H040 489 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SLC6A20Q9NP91 592 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TMEM184CQ9NVA4 438 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 RLIMQ9NVW2 624 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 RBM22Q9NW64 420 aaKnown RBP eCLIP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 AKAP7Q9P0M2 348 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 OR12D3Q9UGF7 316 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 KCND3Q9UK17 655 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SPIN1Q9Y657 262 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ATP23Q9Y6H3 246 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TMEM131Q92545 1883 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TP53BP1Q12888 1972 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SCN1AP35498 2009 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 LOC105369274A0A096LPK9 316 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 A0A1W2PRB8 838 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 NPEPPSL1A6NEC2 478 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 I6L893 689 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 HCRTO43612 131 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 FZD7O75084 574 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TMEM127O75204 238 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 RDH16O75452 317 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 FGF1P05230 155 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 POU2F1P14859 743 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 HPGDP15428 266 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 HLA-DPA1P20036 260 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 KIR3DL1P43629 444 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SELENOPP49908 381 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 CRYBA2P53672 197 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SLC16A1P53985 500 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 PCBP3P57721 371 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ACTR1AP61163 376 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 RPS25P62851 125 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 PITX1P78337 314 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ADIGQ0VDE8 80 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TAF10Q12962 218 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF234Q14588 700 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 HEPACAMQ14CZ8 416 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SEC23BQ15437 767 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 MPPED2Q15777 294 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 GPRC6AQ5T6X5 926 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF660Q6AZW8 331 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 C3orf33Q6P1S2 294 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 NCEH1Q6PIU2 408 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 LYPD4Q6UWN0 246 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 CASP12Q6UXS9 341 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TPRA1Q86W33 373 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 LDLRAD3Q86YD5 345 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SLC30A8Q8IWU4 369 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 OR4N4Q8N0Y3 316 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SLC43A2Q8N370 569 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TOMM5Q8N4H5 51 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 KRTCAP2Q8N6L1 136 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 L3MBTL4Q8NA19 623 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF485Q8NCK3 441 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 C11orf65Q8NCR3 313 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 NAXEQ8NCW5 288 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 OR8J2Q8NGG1 315 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 OR10Q1Q8NGQ4 319 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 OR14A16Q8NHC5 309 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 GEMIN6Q8WXD5 167 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 PNPLA2Q96AD5 504 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 MIB2Q96AX9 1013 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 CMTM7Q96FZ5 175 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 MOGAT1Q96PD6 335 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 TRIM62Q9BVG3 475 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 POLR1EQ9GZS1 481 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 C20orf85Q9H1P6 137 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 PLEKHA1Q9HB21 404 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 CACYBPQ9HB71 228 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SGK2Q9HBY8 427 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 GPN1Q9HCN4 374 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 EXOSC3Q9NQT5 275 aaKnown RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ACER3Q9NUN7 267 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
CNGA1-209ENST00000544810 MGAT4CQ9UBM8 478 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 PLEKHA6Q9Y2H5 1048 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 SLC27A6Q9Y2P4 619 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 KNTC1P50748 2209 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 COL12A1Q99715 3063 aa4.24□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF106Q9H2Y7 1883 aaKnown RBP4.23□□□□□ -1.73
CNGA1-209ENST00000544810 SYNJ2BP-COX16A0A087WUM0 186 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 TMEM218A2RU14 115 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 DISC1C4P0D8 188 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 BLOC1S5-TXNDC5H3BN57 136 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 GFYI3L273 518 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 ZNF749O43361 778 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 LANCL1O43813 399 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 CDC123O75794 336 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-209ENST00000544810 KRT33AO76009 404 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 KDM4BO94953 1096 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 AGFG2O95081 481 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 IFNA10P01566 189 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 GP1BAP07359 652 aa4.23□□□□□ -1.73
CNGA1-209ENST00000544810 SRPRAP08240 638 aaKnown RBP4.23□□□□□ -1.73
CNGA1-209ENST00000544810 HOXC4P09017 264 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms