RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ZNF155Q12901 538 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 SELENBP1Q13228 472 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 LTB4RQ15722 352 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ADIPOQQ15848 244 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 GABRA6Q16445 453 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 BEAN1Q3B7T3 259 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 GRAMD1BQ3KR37 738 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 RABL3Q5HYI8 236 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 DCAF12L2Q5VW00 463 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 OLFML2AQ68BL7 652 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 LEG1Q6P5S2 330 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 VSTM4Q8IW00 320 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 RNF175Q8N4F7 328 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 NUP37Q8NFH4 326 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 OR4N2Q8NGD1 307 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 UBTD2Q8WUN7 234 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 SLC9A6Q92581 669 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 GTF3AQ92664 365 aaKnown RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 RDH5Q92781 318 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 POP5Q969H6 163 aaKnown RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ESAMQ96AP7 390 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF681Q96N22 645 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF416Q9BWM5 594 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 C1QTNF6Q9BXI9 259 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 MS4A7Q9GZW8 240 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 RACGAP1Q9H0H5 632 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF442Q9H7R0 627 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 PLAC1Q9HBJ0 212 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 SLC17A5Q9NRA2 495 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 GIMAP4Q9NUV9 329 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 AURKAIP1Q9NWT8 199 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 NSMCE4AQ9NXX6 385 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 NUDT4Q9NZJ9 180 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 MID2Q9UJV3 735 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 UTS2RQ9UKP6 389 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 CES1P1Q9UKY3 287 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 LRCH1Q9Y2L9 728 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 NOSIPQ9Y314 301 aaKnown RBP3.51□□□□□ -1.85
SNHG1-220ENST00000544550 ANGPTL3Q9Y5C1 460 aa3.51□□□□□ -1.85
SNHG1-220ENST00000544550 HEATR5AQ86XA9 2040 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 IGKV3D-15A0A087WSY6 115 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 A0A087WV62 115 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 GAGE12BA1L429 117 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 C5orf63A6NC05 138 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 GAGE12HA6NDE8 117 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MARCH11A6NNE9 402 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF195O14628 629 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PIP5K1BO14986 540 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SCAF4O95104 1147 aaKnown RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 UTS2O95399 124 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 GPANK1O95872 356 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NGFP01138 241 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 FSHBP01225 129 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 KRT14P02533 472 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 CRYBA1P05813 215 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NGFRP08138 427 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 LINGO3P0C6S8 592 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 NPR2P20594 1047 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 LCN1P31025 176 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MPIP34949 423 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MTNR1AP48039 350 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ALDH9A1P49189 494 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 EVX1P49640 407 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ANXA11P50995 505 aaKnown RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 PGGT1BP53609 377 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SLC18A2Q05940 514 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 FOXF1Q12946 379 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SLC29A2Q14542 456 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 HLXQ14774 488 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 TRIP13Q15645 432 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 TAF9Q16594 264 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 C2orf68Q2NKX9 166 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 TMEM176BQ3YBM2 270 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MMEL1Q495T6 779 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 VPS26BQ4G0F5 336 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 FBXO48Q5FWF7 155 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ARMCX4Q5H9R4 360 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 KPRPQ5T749 579 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 TEDDM1Q5T9Z0 273 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 RUSC1-AS1Q66K80 236 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 C3orf33Q6P1S2 294 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 C16orf87Q6PH81 154 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 SPATA21Q7Z572 469 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ABHD12BQ7Z5M8 362 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 FAM9CQ8IZT9 166 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 METTL4Q8N3J2 472 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 RIBC1Q8N443 379 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 MMGT1Q8N4V1 131 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 WDR31Q8NA23 367 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 OR9A2Q8NGT5 310 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 B4GALNT2Q8NHY0 566 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 STAG3L4Q8TBR4 150 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ANKRD49Q8WVL7 239 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 CKAP2Q8WWK9 683 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 IPCEF1Q8WWN9 437 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 C22orf15Q8WYQ4 148 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 DVL3Q92997 716 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZNF566Q969W8 418 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 ZHX1-C8orf76Q96EF9 292 aa3.5□□□□□ -1.85
SNHG1-220ENST00000544550 CNRIP1Q96F85 164 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms