RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 STXBP4Q6ZWJ1 553 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 C16orf62Q7Z3J2 963 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 MCOLN2Q8IZK6 566 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 CLEC4FQ8N1N0 589 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 FGFRL1Q8N441 504 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 POM121L12Q8N7R1 296 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 TRUB1Q8WWH5 349 aaKnown RBP2.88□□□□□ -1.95
SCFD1-207ENST00000544052 TOMM40LQ969M1 308 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 ATOH8Q96SQ7 321 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 APMAPQ9HDC9 416 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 PAK1IP1Q9NWT1 392 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-207ENST00000544052 EHFQ9NZC4 300 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 PIPOXQ9P0Z9 390 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF221Q9UK13 617 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 ALG6Q9Y672 507 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 MAD1L1Q9Y6D9 718 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 IKBKGQ9Y6K9 419 aa2.88□□□□□ -1.95
SCFD1-207ENST00000544052 BDP1A6H8Y1 2624 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 ELP1O95163 1332 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 FRMPD4Q14CM0 1322 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 CCDC171Q6TFL3 1326 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 LRP5LA4QPB2 252 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OR7A17O14581 309 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 LATO43561 262 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 KLHL41O60662 606 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OPN1MWP04001 364 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 SLC35E2P0CK97 266 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OPN1MW2P0DN77 364 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OPN1MW3P0DN78 364 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF44P15621 663 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 BCL3P20749 454 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 CCL23P55773 120 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OTUD4Q01804 1114 aaKnown RBP2.87□□□□□ -1.95
SCFD1-207ENST00000544052 KCNJ11Q14654 390 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 TP53I3Q53FA7 332 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 WSCD1Q658N2 575 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 FAM71F2Q6NXP2 309 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 GCNT7Q6ZNI0 430 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 TMCO2Q7Z6W1 182 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OTUD6BQ8N6M0 293 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 SYT14Q8NB59 555 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OR51G2Q8NGK0 314 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 AENQ8WTP8 325 aaKnown RBP2.87□□□□□ -1.95
SCFD1-207ENST00000544052 TMEM80Q96HE8 168 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 TGM7Q96PF1 710 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 NPAS2Q99743 824 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 CAPS2Q9BXY5 557 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 DUSP16Q9BY84 665 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 GLIPR2Q9H4G4 154 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 LRRC40Q9H9A6 602 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 MIEF1Q9NQG6 463 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 PNO1Q9NRX1 252 aaKnown RBP2.87□□□□□ -1.95
SCFD1-207ENST00000544052 CUTCQ9NTM9 273 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 CLEC5AQ9NY25 188 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 SIGLEC8Q9NYZ4 499 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 PCSK1NQ9UHG2 260 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 OARD1Q9Y530 152 aa2.87□□□□□ -1.95
SCFD1-207ENST00000544052 MYH9P35579 1960 aaKnown RBP2.87□□□□□ -1.95
SCFD1-207ENST00000544052 A8MX80 341 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 SLC17A2O00624 439 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 MSH4O15457 936 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 CRLF1O75462 422 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 SCRG1O75711 98 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 GAS8-AS1O95177 125 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 TOP1P11387 765 aaKnown RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 ACADSP16219 412 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 NCK1P16333 377 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 ELK3P41970 407 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 RND3P61587 244 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 VLDLRP98155 873 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 FGL1Q08830 312 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 MRPL28Q13084 256 aaKnown RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 LAGE3Q14657 143 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 PDK3Q15120 406 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 DCST2Q5T1A1 773 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 CCDC183Q5T5S1 534 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 TMEM225Q6GV28 225 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 UFSP1Q6NVU6 142 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 CLDN19Q8N6F1 224 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 Q8N9G6 341 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 OR5D13Q8NGL4 314 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 OR4D5Q8NGN0 318 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 OR1F12Q8NHA8 337 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 VN1R17PQ8TDU5 208 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 GLT1D1Q96MS3 346 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 NOL4LQ96MY1 436 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 OR5B2Q96R09 309 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 TAAR1Q96RJ0 339 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 TMEM43Q9BTV4 400 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 OPN3Q9H1Y3 402 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF581Q9P0T4 197 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 L3MBTL1Q9Y468 752 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 WDR19Q8NEZ3 1342 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF318Q5VUA4 2279 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 KMT2EQ8IZD2 1858 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-207ENST00000544052 ERICH4A6NGS2 130 aa2.86□□□□□ -1.95
SCFD1-207ENST00000544052 AP3B1O00203 1094 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms