RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, human

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB35-205	ENST00000543364	CPSF4L	A6NMK7	179 aa	Known RBP	13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	NME4	O00746	187 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	CASK	O14936	926 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	AHSA1	O95433	338 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	IGHV3-9	P01782	118 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	THY1	P04216	161 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	THBD	P07204	575 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	CBL	P22681	906 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	KDELR2	P33947	212 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	PCYT1A	P49585	367 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SLC7A2	P52569	658 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SLC16A1	P53985	500 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SLC17A1	Q14916	467 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	ENTPD8	Q5MY95	495 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	ERICH5	Q6P6B1	374 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	ULK3	Q6PHR2	472 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	PAQR6	Q6TCH4	344 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	C6orf89	Q6UWU4	347 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	ZNF100	Q8IYN0	542 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	GABRG1	Q8N1C3	465 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	DNAJA4	Q8WW22	397 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SLC38A4	Q969I6	547 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	CMTM5	Q96DZ9	223 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SLC47A1	Q96FL8	570 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	CCT8L2	Q96SF2	557 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	HOPX	Q9BPY8	73 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	MED18	Q9BUE0	208 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	LIME1	Q9H400	295 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	C12orf10	Q9HB07	376 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	SEC14L4	Q9UDX3	406 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	NOSIP	Q9Y314	301 aa	Known RBP	13.54	□□□□□ -0.24
RAB35-205	ENST00000543364	AKAP6	Q13023	2319 aa		13.54	□□□□□ -0.24
RAB35-205	ENST00000543364		A0A087WUJ7	227 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	FTCDNL1	E5RQL4	147 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	SIAH2	O43255	324 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	SHOX2	O60902	331 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	LYPD3	O95274	346 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	PNMT	P11086	282 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	PRDX6	P30041	224 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	P2RY4	P51582	365 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	PSME3	P61289	254 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	LTB	Q06643	244 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	LRRC23	Q53EV4	343 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	CYBRD1	Q53TN4	286 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	FBXW10	Q5XX13	1052 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	FAM91A1	Q658Y4	838 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	HACD2	Q6Y1H2	254 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	CARM1	Q86X55	608 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	CDC20B	Q86Y33	519 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	KDM8	Q8N371	416 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	ZIC4	Q8N9L1	334 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	MFSD8	Q8NHS3	518 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	EVA1A	Q9H8M9	152 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	ARL8B	Q9NVJ2	186 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	FAM53C	Q9NYF3	392 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	SELENON	Q9NZV5	590 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	EMC3	Q9P0I2	261 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	C6orf203	Q9P0P8	240 aa	Predicted RBP	13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	SH3GLB1	Q9Y371	365 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	FLVCR1	Q9Y5Y0	555 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364	AKAP9	Q99996	3911 aa		13.53	□□□□□ -0.24
RAB35-205	ENST00000543364		A0A1W2PPR1	153 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	AQP7P3	A6NL99	342 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	LRRN3	E7EW58	273 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	GPR171	O14626	319 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	FMO6P	O60774	539 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	MRPL33	O75394	65 aa	Known RBP	13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	HRG	P04196	525 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	OR1E2	P47887	323 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	GSK3B	P49841	420 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	FOXG1	P55316	489 aa	Predicted RBP	13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	SFRP5	Q5T4F7	317 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	TMEM225	Q6GV28	225 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	ALKBH2	Q6NS38	261 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	WDR88	Q6ZMY6	472 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	ARPIN	Q7Z6K5	226 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	GPAT4	Q86UL3	456 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	OR9K2	Q8NGE7	335 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	PROX1	Q92786	737 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	S100PBP	Q96BU1	408 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	ZNF385A	Q96PM9	386 aa	Known RBP	13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	ACTR6	Q9GZN1	396 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	GPR52	Q9Y2T5	361 aa		13.52	□□□□□ -0.25
RAB35-205	ENST00000543364	TRAV36DV7	A0A075B6V5	113 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	LYZL6	O75951	148 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	PSMB1	P20618	241 aa	Known RBP	13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	IGHV1-2	P23083	117 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	GRPR	P30550	384 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	FOXD4	Q12950	439 aa	Predicted RBP	13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	ZNF613	Q6PF04	617 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	CASP12	Q6UXS9	341 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	LINC00114	Q6XXX2	140 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364		Q6ZT83	130 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	UBE2J2	Q8N2K1	259 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	ADAMTS16	Q8TE57	1224 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	RASSF5	Q8WWW0	418 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	APH1A	Q96BI3	265 aa		13.51	□□□□□ -0.25
RAB35-205	ENST00000543364	TPD52L3	Q96J77	140 aa		13.51	□□□□□ -0.25

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