RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ARPC3O15145 178 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FABP7O15540 132 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FLRT2O43155 660 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ARL6IP5O75915 188 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NDUFB2O95178 105 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 IGKV1D-16P01601 117 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TCRBP04435 133 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TYRP1P17643 537 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 POLR2CP19387 275 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 POU3F3P20264 500 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GDI1P31150 447 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PYCR1P32322 319 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACVR1BP36896 505 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACTR1BP42025 376 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DIO1P49895 249 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GDI2P50395 445 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 EMDP50402 254 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 P2RX3P56373 397 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RAB38P57729 211 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACTR1AP61163 376 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RPS7P62081 194 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SNRPD2P62316 118 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACTA2P62736 377 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ACTG2P63267 376 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 UBE2IP63279 158 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SIRPAP78324 504 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DGCR2P98153 550 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PSG6Q00889 435 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GPR18Q14330 331 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FGFBP1Q14512 234 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ALG11Q2TAA5 492 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TP53I3Q53FA7 332 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC35D3Q5M8T2 416 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ZNF684Q5T5D7 378 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 BCL2L15Q5TBC7 163 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RPL22L1Q6P5R6 122 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PARM1Q6UWI2 310 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 LYPD4Q6UWN0 246 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SEZ6L2Q6UXD5 910 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TMEM184AQ6ZMB5 413 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DGAT2L6Q6ZPD8 337 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SIAH3Q8IW03 269 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TMEFF1Q8IYR6 380 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRC17Q8N6Y2 441 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CYB561A3Q8NBI2 242 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 FAM98AQ8NCA5 519 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR4D9Q8NGE8 314 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR5T3Q8NGG3 340 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR13C5Q8NGS8 318 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR51Q1Q8NH59 317 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR14A16Q8NHC5 309 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GRHL3Q8TE85 626 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DOK4Q8TEW6 326 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SMAP2Q8WU79 429 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 C17orf50Q8WW18 174 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 THAP4Q8WY91 577 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TSACCQ96A04 125 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RERGQ96A58 199 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NECTIN4Q96NY8 510 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 IER2Q9BTL4 223 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RPP25Q9BUL9 199 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 MED28Q9H204 178 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NKX2-4Q9H2Z4 354 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 OR51J1Q9H342 316 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 RANBP3Q9H6Z4 567 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 DIABLOQ9NR28 239 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NUDT15Q9NV35 164 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ANKRD10Q9NXR5 420 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 B3GNT2Q9NY97 397 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 EMC3Q9P0I2 261 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 USP36Q9P275 1121 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SLC23A1Q9UHI7 598 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 ELF5Q9UKW6 265 aaPredicted RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 SPATA2Q9UM82 520 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 HSPB11Q9Y547 144 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 PCDHGA9Q9Y5G4 932 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 NPTNQ9Y639 398 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 AUP1Q9Y679 476 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TRBV23OR9-2A0A075B6M9 112 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A087WUJ7 227 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 MEIKINA0A087WXM9 373 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TEX13CA0A0J9YWL9 993 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A0J9YY10 115 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A1B0GVC2 190 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 A0A1W2PRG6 482 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 LINC00862A6NCI5 91 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 A6NIN4 97 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 EFCAB7A8K855 629 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 C2orf74A8MZ97 194 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 LRRN3E7EW58 273 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 H0Y8X5 98 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TERTO14746 1132 aaKnown RBP4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GPRIN2O60269 458 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 IGF2P01344 180 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 GYPBP06028 91 aa4.76□□□□□ -1.65
ATPAF1-212ENST00000542495 TPOP07202 933 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms