RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 UFL1O94874 794 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 GNA14O95837 355 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 LALBAP00709 142 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 RNH1P13489 461 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 HTR1EP28566 365 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 MDH1P40925 334 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 HLCSP50747 726 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 PLA2G16P53816 162 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 CSTF1Q05048 431 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 SLC10A7Q0GE19 358 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 TMEM31Q5JXX7 168 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 C16orf62Q7Z3J2 963 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 CENPLQ8N0S6 344 aaPredicted RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 KIR3DL3Q8N743 410 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 SUMF2Q8NBJ7 301 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 DENND6BQ8NEG7 585 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 OR51G2Q8NGK0 314 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 PNPT1Q8TCS8 783 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 SRSF12Q8WXF0 261 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 CHCHD10Q8WYQ3 142 aaPredicted RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 FAM3CQ92520 227 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 OSTF1Q92882 214 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 NAT10Q9H0A0 1025 aaKnown RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 MMP26Q9NRE1 261 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 SIGLEC8Q9NYZ4 499 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 PRG3Q9Y2Y8 225 aaPredicted RBP2.74□□□□□ -1.97
RAP1B-224ENST00000541216 UGT2A1Q9Y4X1 527 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 NSD3Q9BZ95 1437 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 HTTP42858 3142 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 ANKRD36BQ8N2N9 1353 aa2.74□□□□□ -1.97
RAP1B-224ENST00000541216 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 NACAE9PAV3 2078 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 SF3B1O75533 1304 aaKnown RBP eCLIP2.73□□□□□ -1.976e-7■■□□□ 14.5
RAP1B-224ENST00000541216 TTC21AQ8NDW8 1320 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 GSAPA4D1B5 854 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 ZSCAN12O43309 604 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 OR1F1O43749 312 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 PRKYO43930 277 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 UGT2B17O75795 530 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 ASNSP08243 561 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 CALCBP10092 127 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 NCF1P14598 390 aaPredicted RBP2.73□□□□□ -1.97
RAP1B-224ENST00000541216 PRKXP51817 358 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 CHRNB3Q05901 458 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 EIF4EBP2Q13542 120 aaPredicted RBP2.73□□□□□ -1.97
RAP1B-224ENST00000541216 MPPED2Q15777 294 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 FAM71F2Q6NXP2 309 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 KIAA1328Q86T90 577 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 VRK2Q86Y07 508 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 ZNF573Q86YE8 665 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 LRRC43Q8N309 656 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 Q8N9L7 120 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 OR56B4Q8NH76 319 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 IL22RA2Q969J5 263 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
RAP1B-224ENST00000541216 NRTNQ99748 197 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 RHBGQ9H310 441 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 ZNF385DQ9H6B1 395 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 GNG12Q9UBI6 72 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 NEUROG3Q9Y4Z2 214 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 PAPPA2Q9BXP8 1791 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 SCN11AQ9UI33 1791 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 IFT172Q9UG01 1749 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 PALLDQ8WX93 1383 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 C5P01031 1676 aa2.73□□□□□ -1.97
RAP1B-224ENST00000541216 KIF13BQ9NQT8 1826 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ARFGEF1Q9Y6D6 1849 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 PRUNE2Q8WUY3 3088 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 VSTM2BA6NLU5 285 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 G3V4G9 280 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 KRTAP4-16G5E9R7 235 aaPredicted RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ZNF780AO75290 641 aaPredicted RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 C4AP0C0L4 1744 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 H2BFMP0C1H6 154 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 HNRNPA3P51991 378 aaKnown RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 TIMM10P62072 90 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 RPS14P62263 151 aaKnown RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 CNTN2Q02246 1040 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 CCDC173Q0VFZ6 552 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 GGTA1PQ4G0N0 100 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 KLF17Q5JT82 389 aaPredicted RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 CASC10Q5T4H9 136 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ACOT7LQ6ZUV0 252 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ARCQ7LC44 396 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ENTHD1Q8IYW4 607 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 CATSPER1Q8NEC5 780 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 SPRYD4Q8WW59 207 aaPredicted RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 RDH5Q92781 318 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 RPUSD4Q96CM3 377 aaKnown RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 PGLYRP4Q96LB8 373 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 CDX2Q99626 313 aaPredicted RBP2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ZNF670Q9BS34 389 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 ZNF416Q9BWM5 594 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 NARFLQ9H6Q4 476 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 COQ10BQ9H8M1 238 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 POLE3Q9NRF9 147 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 RASD1Q9Y272 281 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 SPTBN4Q9H254 2564 aa2.72□□□□□ -1.97
RAP1B-224ENST00000541216 BRCA1P38398 1863 aaKnown RBP2.71□□□□□ -1.98
RAP1B-224ENST00000541216 C4BP0C0L5 1744 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms