RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 VSTM5A8MXK1 200 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 KLF11O14901 512 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 GPIP06744 558 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 ITGA2P17301 1181 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 SRP14P37108 136 aaKnown RBP23.29■■□□□ 1.32
CHFR-218ENST00000540963 NAAAQ02083 359 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 EMX2Q04743 252 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 FUT5Q11128 374 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 C12orf54Q6X4T0 127 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 NUP37Q8NFH4 326 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 OR4A15Q8NGL6 344 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 OR1K1Q8NGR3 316 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 C1orf159Q96HA4 380 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 ZNF442Q9H7R0 627 aa23.29■■□□□ 1.32
CHFR-218ENST00000540963 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.29■■□□□ 1.32
CHFR-218ENST00000540963 V9GYY5 206 aaPredicted RBP23.29■■□□□ 1.32
CHFR-218ENST00000540963 DYSFO75923 2080 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 LRP5LA4QPB2 252 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 LILRA1O75019 489 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 HOXB1P14653 301 aaPredicted RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 CDH2P19022 906 aaPredicted RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 TACR3P29371 465 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 UBE2NP61088 152 aaKnown RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 HPCAP84074 193 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 SAXO2Q658L1 398 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 WDR93Q6P2C0 686 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 TNFAIP8L2Q6P589 184 aaPredicted RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 ANKRD16Q6P6B7 361 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 CNOT9Q92600 299 aaKnown RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 RAB8BQ92930 207 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 AURKBQ96GD4 344 aaPredicted RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 ZIM3Q96PE6 472 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 ZNF385AQ96PM9 386 aaKnown RBP23.28■■□□□ 1.32
CHFR-218ENST00000540963 TMEM109Q9BVC6 243 aa23.28■■□□□ 1.32
CHFR-218ENST00000540963 AQP7P3A6NL99 342 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 ZNF587BE7ETH6 402 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 KRT33AO76009 404 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 IGLV1-44P01699 117 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 BPGMP07738 259 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 DAOP14920 347 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 UQCRBP14927 111 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 APEX1P27695 318 aaKnown RBP23.27■■□□□ 1.32
CHFR-218ENST00000540963 KHKP50053 298 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 CDH15P55291 814 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 ZNF786Q8N393 782 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 VPS37AQ8NEZ2 397 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 NEURL3Q96EH8 262 aa23.27■■□□□ 1.32
CHFR-218ENST00000540963 PRSS51A0A1B0GVH4 220 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 LIPT2A6NK58 231 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 CLDN24A6NM45 220 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 AP3D1O14617 1153 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 SCN2BO60939 215 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 SKAP2O75563 359 aaPredicted RBP23.26■■□□□ 1.31
CHFR-218ENST00000540963 VAMP5O95183 116 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 CFPP27918 469 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 DVL1P1P54792 670 aaPredicted RBP23.26■■□□□ 1.31
CHFR-218ENST00000540963 GSTA3Q16772 222 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 GPAT3Q53EU6 434 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 ANXA8L1Q5VT79 327 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 TMEM99Q8N816 258 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 BCL2L2Q92843 193 aaPredicted RBP23.26■■□□□ 1.31
CHFR-218ENST00000540963 PLA2G12AQ9BZM1 189 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 ADAM19Q9H013 955 aa23.26■■□□□ 1.31
CHFR-218ENST00000540963 ZC3H12DA2A288 527 aaKnown RBP23.25■■□□□ 1.31
CHFR-218ENST00000540963 AGAP5A6NIR3 686 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 ITM2AO43736 263 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 CECR9P0C854 216 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 SH3BGRP55822 239 aaPredicted RBP23.25■■□□□ 1.31
CHFR-218ENST00000540963 TXNL4AP83876 142 aaKnown RBP23.25■■□□□ 1.31
CHFR-218ENST00000540963 IFFO1Q0D2I5 559 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 CEACAM7Q14002 265 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 GNA13Q14344 377 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 DEF8Q6ZN54 512 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 TRNT1Q96Q11 434 aaKnown RBP23.25■■□□□ 1.31
CHFR-218ENST00000540963 DOK1Q99704 481 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 METRNQ9UJH8 293 aa23.25■■□□□ 1.31
CHFR-218ENST00000540963 CFAP73A6NFT4 308 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 SPRY1O43609 319 aaPredicted RBP23.24■■□□□ 1.31
CHFR-218ENST00000540963 AKR7A3O95154 331 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 LGI1O95970 557 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 IGKV3-15P01624 115 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 TMEM225Q6GV28 225 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 VHLLQ6RSH7 139 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 MREGQ8N565 214 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP23.24■■□□□ 1.31
CHFR-218ENST00000540963 ANKK1Q8NFD2 765 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 ANKRD27Q96NW4 1050 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 LINC00470Q9BZP3 86 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 C20orf27Q9GZN8 174 aa23.24■■□□□ 1.31
CHFR-218ENST00000540963 TENM1Q9UKZ4 2725 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 PRAMEF27A3QJZ7 478 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 WIPF1O43516 503 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 NPR2P20594 1047 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 IL2RGP31785 369 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 POU3F1Q03052 451 aaPredicted RBP23.23■■□□□ 1.31
CHFR-218ENST00000540963 EPS8Q12929 822 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 RIN1Q13671 783 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 MPP2Q14168 576 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 OR7A5Q15622 319 aa23.23■■□□□ 1.31
CHFR-218ENST00000540963 GPAT4Q86UL3 456 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms