RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 GTF2E2P29084 291 aaKnown RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 KDELR2P33947 212 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PCYT1AP49585 367 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 SLC16A1P53985 500 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CDH12P55289 794 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 KRTAP10-9P60411 292 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PSME3P61289 254 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 EGR4Q05215 589 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 SLC17A1Q14916 467 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PDK3Q15120 406 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 NPTX1Q15818 432 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CYBRD1Q53TN4 286 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ENTPD8Q5MY95 495 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 GKAP1Q5VSY0 366 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 FAM91A1Q658Y4 838 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 HACD2Q6Y1H2 254 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 STAC2Q6ZMT1 411 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 GPAT4Q86UL3 456 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 MED12LQ86YW9 2145 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF100Q8IYN0 542 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM99Q8N816 258 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ADAMTS16Q8TE57 1224 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 SLC38A4Q969I6 547 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 TPD52L3Q96J77 140 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 LURAP1Q96LR2 239 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 KCTD14Q9BQ13 255 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PTDSS2Q9BVG9 487 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ALG2Q9H553 416 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 FAM53CQ9NYF3 392 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 ADA2Q9NZK5 511 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 C6orf203Q9P0P8 240 aaPredicted RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PRSS50Q9UI38 385 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 BAG5Q9UL15 447 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 INTS1Q8N201 2190 aaKnown RBP8.19□□□□□ -1.1
SNHG1-215ENST00000540904 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
SNHG1-215ENST00000540904 A0A087WUJ7 227 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 AQP7P3A6NL99 342 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CXCR6O00574 342 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 NDUFAB1O14561 156 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CHP2O43745 196 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 FMO6PO60774 539 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 MRPL33O75394 65 aaKnown RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ADAP00813 363 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 IGHV3-9P01782 118 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CBLP22681 906 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 EDNRAP25101 427 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 NTF4P34130 210 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 OR1E2P47887 323 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 OR3A2P47893 321 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 GSK3BP49841 420 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 DAZAP2Q15038 168 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TSC22D1Q15714 1073 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 SWT1Q5T5J6 900 aaKnown RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 FAM69AQ5T7M9 428 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TMEM225Q6GV28 225 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF613Q6PF04 617 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 DEF8Q6ZN54 512 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CXorf67Q86X51 503 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CARM1Q86X55 608 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 GABRG1Q8N1C3 465 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 UBE2J2Q8N2K1 259 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ANKS4BQ8N8V4 417 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 MFSD8Q8NHS3 518 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TAAR8Q969N4 342 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 APH1AQ96BI3 265 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ZC3HAV1LQ96H79 300 aaKnown RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ACTR6Q9GZN1 396 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
SNHG1-215ENST00000540904 SPAG4Q9NPE6 437 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 RASSF1Q9NS23 344 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ARL8BQ9NVJ2 186 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TAGLN3Q9UI15 199 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 ADAM21Q9UKJ8 722 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 SLC7A7Q9UM01 511 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TESMINQ9Y4I5 508 aa8.18□□□□□ -1.1
SNHG1-215ENST00000540904 TRAV36DV7A0A075B6V5 113 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 TRAPPC13A5PLN9 417 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 FTCDNL1E5RQL4 147 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 M0R082 166 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 OR2T1O43869 369 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ZNF682O95780 498 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 THY1P04216 161 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 NCK1P16333 377 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 PSMB1P20618 241 aaKnown RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 IL32P24001 234 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 P2RY4P51582 365 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 TAS2R41P59536 307 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 SELENOWP63302 87 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 MXRA7P84157 204 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 IL1RL1Q01638 556 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 FOXD4Q12950 439 aaPredicted RBP8.17□□□□□ -1.1
SNHG1-215ENST00000540904 P2RY6Q15077 328 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 POU4F3Q15319 338 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 FBXW9Q5XUX1 488 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 ALKBH2Q6NS38 261 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 C5orf46Q6UWT4 87 aa8.17□□□□□ -1.1
SNHG1-215ENST00000540904 CASP12Q6UXS9 341 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms