RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 HOXB9P17482 250 aaPredicted RBP12.68□□□□□ -0.38
MSRB3-209ENST00000540804 NCF2P19878 526 aaPredicted RBP12.68□□□□□ -0.38
MSRB3-209ENST00000540804 PTAFRP25105 342 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 TTKP33981 857 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 SELENOPP49908 381 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 FABP6P51161 128 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 SLC18A1P54219 525 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 RGNQ15493 299 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 RNF220Q5VTB9 566 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 WBP2NLQ6ICG8 309 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 EPGNQ6UW88 154 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 LINGO2Q7L985 606 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 AAED1Q7RTV5 226 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 COMTD1Q86VU5 262 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 FUNDC1Q8IVP5 155 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 MSRB3Q8IXL7 192 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 ZNF440Q8IYI8 595 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 C3orf49Q96BT1 292 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 EBF4Q9BQW3 602 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 PRR14Q9BWN1 585 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 AMBRA1Q9C0C7 1298 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 RMND5AQ9H871 391 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 SLCO1B3Q9NPD5 702 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 SLC25A37Q9NYZ2 338 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 SEC14L4Q9UDX3 406 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 ATP23Q9Y6H3 246 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 FAM234BA2RU67 622 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 A8MVM7 634 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 CLIC1O00299 241 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 HNRNPCL1O60812 293 aaKnown RBP12.67□□□□□ -0.38
MSRB3-209ENST00000540804 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 UQCRBP14927 111 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 ZNF311Q5JNZ3 666 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 OR7E24Q6IFN5 339 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 KLHL17Q6TDP4 642 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 TMEM45BQ96B21 275 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 SLC25A36Q96CQ1 311 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 RADILQ96JH8 1075 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 DHRS9Q9BPW9 319 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 SPATA9Q9BWV2 254 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 CALML5Q9NZT1 146 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 DCTN4Q9UJW0 460 aa12.67□□□□□ -0.38
MSRB3-209ENST00000540804 TMEM229AB2RXF0 380 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 ATP6V1G2-DDX39BF2Z307 99 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 UPK3AO75631 287 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 LY6HO94772 140 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 LGI1O95970 557 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 MPGP29372 298 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 IDH3AP50213 366 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 COPZ1P61923 177 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 TUBA1BP68363 451 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 TUBA4AP68366 448 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 EGR4Q05215 589 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 DMTNQ08495 405 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 LARS2Q15031 903 aaKnown RBP12.66□□□□□ -0.38
MSRB3-209ENST00000540804 ETFDHQ16134 617 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 GLIPR1L2Q4G1C9 344 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 PAGE3Q5JUK9 113 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 TMEM225Q6GV28 225 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 MSANTD1Q6ZTZ1 278 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 CREB3L2Q70SY1 520 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 TUBA1AQ71U36 451 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 EPHX4Q8IUS5 362 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 MUC15Q8N387 334 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 NFKBIDQ8NI38 313 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 KTI12Q96EK9 354 aaPredicted RBP12.66□□□□□ -0.38
MSRB3-209ENST00000540804 PTDSS2Q9BVG9 487 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 TAPBPLQ9BX59 468 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 A4GALTQ9NPC4 353 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 CBLN4Q9NTU7 201 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 MOKQ9UQ07 419 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 MGAT4BQ9UQ53 548 aa12.66□□□□□ -0.38
MSRB3-209ENST00000540804 A0A096LNT2 108 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 NR5A2O00482 541 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 TPST1O60507 370 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 NPIPB7O75200 414 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 CRLF1O75462 422 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 CBLP22681 906 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
MSRB3-209ENST00000540804 MAP2K6P52564 334 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 NUDT6P53370 316 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 PRAMEF8Q5VWM4 474 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 PRAMEF7Q5VXH5 474 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 NIPAL3Q6P499 406 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 FBXL14Q8N1E6 418 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 ZNF525Q8N782 197 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 ALKBH3Q96Q83 286 aaPredicted RBP12.65□□□□□ -0.38
MSRB3-209ENST00000540804 WFDC6Q9BQY6 131 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 SF3B5Q9BWJ5 86 aaKnown RBP12.65□□□□□ -0.38
MSRB3-209ENST00000540804 GRIP2Q9C0E4 1043 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 IKZF5Q9H5V7 419 aa12.65□□□□□ -0.38
MSRB3-209ENST00000540804 SEC61A2Q9H9S3 476 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms