RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 TTLQ8NG68 377 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF578Q96N58 590 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CD93Q9NPY3 652 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TAS2R10Q9NYW0 307 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TBC1D3EA0A087X179 549 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ANKRD20A5PA0PJZ0 165 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 KDM4BO94953 1096 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 RPP14O95059 124 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SPDEFO95238 335 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 PAK4O96013 591 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 PLATP00750 562 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SERPINA3P01011 423 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 APOC3P02656 99 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF35P13682 527 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 IL32P24001 234 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 EPHA4P54764 986 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF234Q14588 700 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 VN1R4Q7Z5H5 301 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 GRASPQ7Z6J2 395 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR6K6Q8NGW6 343 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR1S1Q8NH92 325 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ZDHHC1Q8WTX9 485 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TAS2R5Q9NYW4 299 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 MOKQ9UQ07 419 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 IER3IP1Q9Y5U9 82 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TBC1D3KA0A087X1G2 549 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 A0A1B0GTH9 108 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TBC1D3BA6NDS4 549 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TBC1D3FA6NER0 549 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SMAD9O15198 467 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR2A4O95047 310 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 NID1P14543 1247 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SOX2P48431 317 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 CBFBQ13951 182 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ELAVL3Q14576 367 aaKnown RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TMEM52BQ4KMG9 183 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 YOD1Q5VVQ6 348 aaPredicted RBP12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TBC1D3GQ6DHY5 549 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR6V1Q8N148 313 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR2L13Q8N349 312 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SPICQ8N5J4 248 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 TMIEQ8NEW7 156 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF350Q9GZX5 532 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 PLEKHA1Q9HB21 404 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 SESN1Q9Y6P5 492 aa12.79□□□□□ -0.36
SCNN1A-215ENST00000540037 RP2O75695 350 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ZFPL1O95159 310 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 CEBPBP17676 345 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 WASP42768 502 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 KCNAB1Q14722 419 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PLPP4Q5VZY2 271 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RNF113BQ8IZP6 322 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF619Q8N2I2 560 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 BVESQ8NE79 360 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 NCDNQ9UBB6 729 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 OPN4Q9UHM6 478 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 HRH3Q9Y5N1 445 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 AIPO00170 330 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RLN1P04808 185 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ADH1AP07327 375 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 GABRA1P14867 456 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RAP2BP61225 183 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ACTC1P68032 377 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ACTA1P68133 377 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 EIPR1Q53HC9 387 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RAB42Q8N4Z0 105 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF454Q8N9F8 522 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 OR4E2Q8NGC2 313 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 OR2L8Q8NGY9 312 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 CNN2Q99439 309 aaKnown RBP12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PRSS16Q9NQE7 514 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 HAO2Q9NYQ3 351 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PFDN2Q9UHV9 154 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 BAIAP2Q9UQB8 552 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 TRBV23OR9-2A0A075B6M9 112 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 H0YC42 278 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 GOSR2O14653 212 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 PRICKLE3O43900 615 aaPredicted RBP12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RLN2P04090 185 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 HIST1H2ABP04908 130 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 FGF2P09038 288 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 CPN1P15169 458 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 TYRP1P17643 537 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 TPMTP51580 245 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 STX4Q12846 297 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 RUNX2Q13950 521 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 FGL2Q14314 439 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ETFDHQ16134 617 aa12.78□□□□□ -0.36
SCNN1A-215ENST00000540037 ODF4Q2M2E3 257 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms