RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TCEAL2Q9H3H9 227 aaPredicted RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM38AQ9H6F2 299 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 SIDT1Q9NXL6 827 aaKnown RBP9.24□□□□□ -0.93
TRAF1-202ENST00000540010 ALKBH4Q9NXW9 302 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 PRODH2Q9UF12 536 aa9.24□□□□□ -0.93
TRAF1-202ENST00000540010 MUC22E2RYF6 1773 aaPredicted RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 A0A087WUU8 490 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZC3H12DA2A288 527 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 TCRBP04435 133 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 F13BP05160 661 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 OR8G3PP0DMU2 310 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 UGT2B7P16662 529 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 PRKACAP17612 351 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 RBMXP38159 391 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 RIDAP52758 137 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ERV3-1Q14264 604 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ALG10Q5BKT4 473 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 DCST2Q5T1A1 773 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 SFXN4Q6P4A7 337 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZER1Q7Z7L7 766 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 GTPBP8Q8N3Z3 284 aaPredicted RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 OR4M1Q8NGD0 313 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF226Q9NYT6 803 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 GPN3Q9UHW5 284 aaPredicted RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF208O43345 1280 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 MTRF1O75570 445 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 CCNOP22674 350 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 HTR2AP28223 471 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 CD34P28906 385 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 GDNFP39905 211 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF322Q6U7Q0 402 aaPredicted RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 BAIAP2L2Q6UXY1 529 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF793Q6ZN11 406 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 KCTD20Q7Z5Y7 419 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF619Q8N2I2 560 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 NANOGP1Q8N7R0 232 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 UCN3Q969E3 161 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 C1GALT1Q9NS00 363 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 FBXL2Q9UKC9 423 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 SLC35A3Q9Y2D2 325 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 GVINP1Q7Z2Y8 2422 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 AKR7A2O43488 359 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 PRSS23O95084 383 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 MAKP20794 623 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 PEBP1P30086 187 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 VEGFCP49767 419 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 HHEXQ03014 270 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 RAB11BQ15907 218 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 PRSS53Q2L4Q9 553 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 UBE3DQ7Z6J8 389 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 SIAH3Q8IW03 269 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM185AQ8NFB2 350 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 AMDHD1Q96NU7 426 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 ATP13A2Q9NQ11 1180 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 SLAMF7Q9NQ25 335 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 TAS2R8Q9NYW2 309 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 C14orf166Q9Y224 244 aaKnown RBP9.23□□□□□ -0.93
TRAF1-202ENST00000540010 NAALAD2Q9Y3Q0 740 aa9.23□□□□□ -0.93
TRAF1-202ENST00000540010 OR5K4A6NMS3 321 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 F5H5P2 479 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ACOT7O00154 380 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF616Q08AN1 781 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SGCAQ16586 387 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ESPNLQ6ZVH7 1005 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ABHD4Q8TB40 342 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 BRIX1Q8TDN6 353 aaKnown RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR14A2Q96R54 314 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 PDCD1LG2Q9BQ51 273 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ASF1BQ9NVP2 202 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 WSB2Q9NYS7 404 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 NTNG1Q9Y2I2 539 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 CKAP5Q14008 2032 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 RTTNQ86VV8 2226 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 TMEM72A0PK05 275 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 F8W036 122 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 MAGEB4O15481 346 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 ZNF217O75362 1048 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 AK1P00568 194 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 APOC1P02654 83 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 MAOBP27338 520 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 AGTR1P30556 359 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 VAMP2P63027 116 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 PLCXD2Q0VAA5 305 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 GRM7Q14831 915 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 HBMQ6B0K9 141 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 OR56B4Q8NH76 319 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 LGALS14Q8TCE9 139 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 GPR148Q8TDV2 347 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SLC37A2Q8TED4 501 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 NPRL2Q8WTW4 380 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SMAP2Q8WU79 429 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SLC25A46Q96AG3 418 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SCARF2Q96GP6 870 aaPredicted RBP9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SEC22AQ96IW7 307 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SLC6A18Q96N87 628 aa9.22□□□□□ -0.93
TRAF1-202ENST00000540010 SCGB3A2Q96PL1 93 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms