RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 OLIG3Q7RTU3 272 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 C6orf120Q7Z4R8 191 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 TEX29Q8N6K0 151 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 OR9K2Q8NGE7 335 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 OR5AK3PQ8NH89 298 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 CLDND2Q8NHS1 167 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 MAGEE2Q8TD90 523 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 CKAP2Q8WWK9 683 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 ZNF385AQ96PM9 386 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 ZNF317Q96PQ6 595 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 LRRC37BQ96QE4 947 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 PRPF18Q99633 342 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 ZNF747Q9BV97 191 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 DYNLRB1Q9NP97 96 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 OXSMQ9NWU1 459 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 USP22Q9UPT9 525 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 TMED7Q9Y3B3 224 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 FIS1Q9Y3D6 152 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 DNAJC15Q9Y5T4 150 aa10.05□□□□□ -0.8
CLSTN3-209ENST00000539982 TMEM72A0PK05 275 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 ZNF587BE7ETH6 402 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 SKAP2O75563 359 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 IGKV3-15P01624 115 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 PROCP04070 461 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 EPHA1P21709 976 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 MAPK1P28482 360 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 TUBA1BP68363 451 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 TUBA4AP68366 448 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 HBA1P69905 142 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 POU3F1Q03052 451 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 FAHD2BQ6P2I3 314 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 TUBA1AQ71U36 451 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 C16orf62Q7Z3J2 963 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 ARFGAP2Q8N6H7 521 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 TMEM99Q8N816 258 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 UBLCP1Q8WVY7 318 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 FAHD2AQ96GK7 314 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 RACGAP1Q9H0H5 632 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 SERHL2Q9H4I8 314 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 SEC61A2Q9H9S3 476 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 LPAR2Q9HBW0 351 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 EXOSC3Q9NQT5 275 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 POLE3Q9NRF9 147 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 EXD2Q9NVH0 621 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 OSGIN1Q9UJX0 560 aa10.04□□□□□ -0.8
CLSTN3-209ENST00000539982 A0A096LPE4 126 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 A0A1W2PPZ6 126 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 OR6C65A6NJZ3 312 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 GLRA3O75311 464 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 LYPLA1O75608 230 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 SASH3O75995 380 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 AKR7A3O95154 331 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 TFP02787 698 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 ABHD2P08910 425 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 CPA3P15088 417 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 CBR1P16152 277 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 COL8A2P25067 703 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 GPR6P46095 362 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 POLR2HP52434 150 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 KCNJ10P78508 379 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 PTGR1Q14914 329 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 CCDC153Q494R4 210 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 SLC9B1Q4ZJI4 515 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 KANK2Q63ZY3 851 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 TMEM225Q6GV28 225 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 TYW3Q6IPR3 259 aaKnown RBP10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 CDK20Q8IZL9 346 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 CNPY4Q8N129 248 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 OR51F2Q8NH61 342 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 MZB1Q8WU39 189 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 ZG16BQ96DA0 208 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 PPP3R2Q96LZ3 170 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 TPK1Q9H3S4 243 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 WDR45Q9Y484 360 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 PCDHGB1Q9Y5G3 927 aa10.03□□□□□ -0.8
CLSTN3-209ENST00000539982 TRAV20A0A0B4J274 112 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 IGHV2OR16-5A0A0B4J2B6 119 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 A0A0G2JK05 382 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 A0A1W2PPM1 405 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 ZC3H12DA2A288 527 aaKnown RBP10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 LIPT2A6NK58 231 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 AQP7P3A6NL99 342 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 RIPK2O43353 540 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 PLIN3O60664 434 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 AGR2O95994 175 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 PNPP00491 289 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 GPIP06744 558 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 FGF4P08620 206 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 CELA3BP08861 270 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 GAAP10253 952 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 SAGP10523 405 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 PRPS1L1P21108 318 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 TACR3P29371 465 aa10.02□□□□□ -0.81
CLSTN3-209ENST00000539982 SOAT1P35610 550 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms