RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RTL4Q6ZR62 310 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 OAFQ86UD1 273 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 LNX2Q8N448 690 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 MFSD4AQ8N468 514 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 OR4Q3Q8NH05 313 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 TMEM234Q8WY98 164 aa15.36■□□□□ 0.05
COPS3-212ENST00000539941 RPL36Q9Y3U8 105 aaKnown RBP15.36■□□□□ 0.05
COPS3-212ENST00000539941 TPRP12270 2363 aaKnown RBP15.36■□□□□ 0.05
COPS3-212ENST00000539941 SPAARA0A1B0GVQ0 90 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 ANKUB1A6NFN9 424 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SURF4O15260 269 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 OR7A10O76100 309 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 MT-ND2P03891 347 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CDK1P06493 297 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CELA2AP08217 269 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CEACAM1P13688 526 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SLC15A1P46059 708 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 NOVA1P51513 510 aaKnown RBP15.35■□□□□ 0.05
COPS3-212ENST00000539941 POLR2HP52434 150 aaKnown RBP15.35■□□□□ 0.05
COPS3-212ENST00000539941 NUDT6P53370 316 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 DLX5P56178 289 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SNTA1Q13424 505 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 COL28A1Q2UY09 1125 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 GRINAQ7Z429 371 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 RAB43Q86YS6 212 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 ASCC1Q8N9N2 400 aaKnown RBP15.35■□□□□ 0.05
COPS3-212ENST00000539941 ST8SIA1Q92185 356 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 TAS2R10Q9NYW0 307 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 KLRF1Q9NZS2 232 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 ZNF337Q9Y3M9 751 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 TAF4O00268 1085 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 BHLHE40O14503 412 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 GNB5O14775 395 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CXCR1P25024 350 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SLC6A6P31641 620 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SOX3P41225 446 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SSR4P51571 173 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 MLF1P58340 268 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 EMX1Q04741 257 aaPredicted RBP15.35■□□□□ 0.05
COPS3-212ENST00000539941 QPRTQ15274 297 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SYT14P1Q58G82 188 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 SLC22A16Q86VW1 577 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 RPS19BP1Q86WX3 136 aaKnown RBP15.35■□□□□ 0.05
COPS3-212ENST00000539941 OR10G3Q8NGC4 313 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 MUL1Q969V5 352 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 LRR1Q96L50 414 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CNTNAP3BQ96NU0 1288 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 RHNO1Q9BSD3 238 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 CNTNAP3Q9BZ76 1288 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 METTL7AQ9H8H3 244 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 AMBNQ9NP70 447 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 DNAJC27Q9NZQ0 273 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 OSGIN1Q9UJX0 560 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 FBXL4Q9UKA2 621 aa15.35■□□□□ 0.05
COPS3-212ENST00000539941 FAM25AB3EWG3 89 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 FAM25CB3EWG5 89 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 FAM25GB3EWG6 89 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 PRODHO43272 600 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 FUT1P19526 365 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 PTGDSP41222 190 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 TOMM34Q15785 309 aaPredicted RBP15.34■□□□□ 0.05
COPS3-212ENST00000539941 C5orf46Q6UWT4 87 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 SLC46A3Q7Z3Q1 461 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 STX19Q8N4C7 294 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 OR6Q1Q8NGQ2 317 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 C9orf43Q8TAL5 461 aaPredicted RBP15.34■□□□□ 0.05
COPS3-212ENST00000539941 ASB15Q8WXK1 588 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 FCGR1BQ92637 280 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 ZNF524Q96C55 264 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 ZNF582Q96NG8 517 aaPredicted RBP15.34■□□□□ 0.05
COPS3-212ENST00000539941 IP6K3Q96PC2 410 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 KLHDC3Q9BQ90 382 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 LHPPQ9H008 270 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 FN3KQ9H479 309 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 SLA2Q9H6Q3 261 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 MCCC2Q9HCC0 563 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 P4HTMQ9NXG6 502 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 GPR83Q9NYM4 423 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 PPP4R1LQ9P1A2 415 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 WIF1Q9Y5W5 379 aa15.34■□□□□ 0.05
COPS3-212ENST00000539941 ACACBO00763 2458 aa15.33■□□□□ 0.05
COPS3-212ENST00000539941 TRAV27A0A087WT01 109 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 LOC105371267A0A1B0GV96 52 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 IRGMA1A4Y4 181 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 KDM4EB2RXH2 506 aaPredicted RBP15.33■□□□□ 0.04
COPS3-212ENST00000539941 M0R3G1 203 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 GABARAPO95166 117 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 NDUFB2O95178 105 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 CH25HO95992 272 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 SERPINA7P05543 415 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 MLLT10P55197 1068 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 PRPS1P60891 318 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 GABREP78334 506 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 EGR4Q05215 589 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 ST3GAL4Q11206 333 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 FHL1Q13642 323 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 TBCEQ15813 527 aaPredicted RBP15.33■□□□□ 0.04
COPS3-212ENST00000539941 ZNF74Q16587 644 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 H3F3CQ6NXT2 135 aa15.33■□□□□ 0.04
COPS3-212ENST00000539941 OR51A7Q8NH64 312 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms