RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 MFSD8Q8NHS3 518 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 MCUR1Q96AQ8 359 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 GMPPAQ96IJ6 420 aaPredicted RBP11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 MPP4Q96JB8 637 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 PSD2Q9BQI7 771 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 NAA11Q9BSU3 229 aaPredicted RBP11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 SFXN3Q9BWM7 321 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 NDUFAF4Q9P032 175 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 KLHL13Q9P2N7 655 aa11.34□□□□□ -0.59
TSPAN9-207ENST00000539631 DIDO1Q9BTC0 2240 aaKnown RBP11.33□□□□□ -0.59
TSPAN9-207ENST00000539631 LRRN3E7EW58 273 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 KPNA4O00629 521 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 DVL2O14641 736 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 EIF1BO60739 113 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 SS18L1O75177 396 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 DIRAS1O95057 198 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 STAMBPO95630 424 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 CLDN1O95832 211 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 PLGP00747 810 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 BGLAPP02818 100 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 CRHP06850 196 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 THRBP10828 461 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 IFNA8P32881 189 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 UGT2B15P54855 530 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 H3F3AP84243 136 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ST3GAL3Q11203 375 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 RNPS1Q15287 305 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 IQCCQ4KMZ1 466 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 OTUD3Q5T2D3 398 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ABLIM2Q6H8Q1 611 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 PAQR6Q6TCH4 344 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 BTLAQ7Z6A9 289 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 TUSC5Q8IXB3 177 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 OFCC1Q8IZS5 231 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC43A2Q8N370 569 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 TMEM255BQ8WV15 326 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 LRGUKQ96M69 825 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF300Q96RE9 604 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 SEPHS2Q99611 448 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 EPYCQ99645 322 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 FNDC11Q9BVV2 318 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 LRMDAQ9H2I8 198 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 GLRX2Q9NS18 164 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 MAN2C1Q9NTJ4 1040 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 SEC14L4Q9UDX3 406 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 SLC7A8Q9UHI5 535 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ING1Q9UK53 422 aaPredicted RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 POMPQ9Y244 141 aa11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 INTS1Q8N201 2190 aaKnown RBP11.33□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF716A6NP11 495 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 OR2T1O43869 369 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 FZD7O75084 574 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 FABP3P05413 133 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 RHCEP18577 417 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 GTF2E2P29084 291 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 GRPRP30550 384 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 AGTR1P30556 359 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 RBM34P42696 430 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 P2RY4P51582 365 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 CTBP2P56545 445 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 TRAM2Q15035 370 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 ASRGL1Q7L266 308 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 NUFIP2Q7Z417 695 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 ZDHHC21Q8IVQ6 265 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 C10orf53Q8N6V4 93 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 PIK3C3Q8NEB9 887 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 OR6S1Q8NH40 331 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 PFN4Q8NHR9 129 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 PIGXQ8TBF5 258 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 TMEM239Q8WW34 195 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 STARD4Q96DR4 205 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 TRIM15Q9C019 465 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 KCNJ16Q9NPI9 418 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 MEPEQ9NQ76 525 aaPredicted RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 KLHL9Q9P2J3 617 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 EMC9Q9Y3B6 208 aa11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
TSPAN9-207ENST00000539631 AQP7P3A6NL99 342 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 ENO4A6NNW6 628 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 EEF1E1-BLOC1S5C9J1V9 151 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 M0R082 166 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 EEF1E1O43324 174 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 SMNDC1O75940 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 CH25HO95992 272 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 CGAP01215 116 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 YES1P07947 543 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 ITGA2P17301 1181 aa11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 GRNP28799 593 aaKnown RBP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
TSPAN9-207ENST00000539631 FLOT2Q14254 428 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms