RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PON3Q15166 354 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 TP53I3Q53FA7 332 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 PTCRAQ6ISU1 281 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
LIMK1-208ENST00000538333 FAM122BQ7Z309 247 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 CEACAM19Q7Z692 300 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 PRR22Q8IZ63 422 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 GHSRQ92847 366 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 TTTY10Q9BZA0 68 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 SLC22A4Q9H015 551 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF304Q9HCX3 659 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 MMP25Q9NPA2 562 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 B3GAT2Q9NPZ5 323 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 MALT1Q9UDY8 824 aa12.79□□□□□ -0.36
LIMK1-208ENST00000538333 MAGEB4O15481 346 aaPredicted RBP12.78□□□□□ -0.36
LIMK1-208ENST00000538333 SLC19A2O60779 497 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 MYF5P13349 255 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 FBLP22087 321 aaKnown RBP12.78□□□□□ -0.36
LIMK1-208ENST00000538333 AQP2P41181 271 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 ACTA2P62736 377 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 ACTG2P63267 376 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 LTBQ06643 244 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 LGALS3BPQ08380 585 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 IL10RAQ13651 578 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 LINC01590Q5TEZ4 76 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 PRSS42Q7Z5A4 293 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 TPRA1Q86W33 373 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 GPR135Q8IZ08 494 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 Q8N402 240 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 MS4A15Q8N5U1 240 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 TEX19Q8NA77 164 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 CLDN23Q96B33 292 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 KCTD12Q96CX2 325 aaKnown RBP12.78□□□□□ -0.36
LIMK1-208ENST00000538333 DEPDC7Q96QD5 511 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 LAT2Q9GZY6 243 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 ADAM19Q9H013 955 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
LIMK1-208ENST00000538333 COPS3Q9UNS2 423 aa12.78□□□□□ -0.36
LIMK1-208ENST00000538333 A0A1B0GVT2 93 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 K7ESF4 209 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 TO15178 435 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 APEHP13798 732 aaKnown RBP12.77□□□□□ -0.36
LIMK1-208ENST00000538333 ELK1P19419 428 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 LCN1P31025 176 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 UQCRC1P31930 480 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 GRK6P43250 576 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 OR10A3P58181 314 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 DCAF7P61962 342 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 ZP2Q05996 745 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 CDK5R1Q15078 307 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 ACSM3Q53FZ2 586 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 IDNKQ5T6J7 187 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 SFXN4Q6P4A7 337 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 RAB43Q86YS6 212 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 RDH10Q8IZV5 341 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 GHDCQ8N2G8 530 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 Q8N9G6 341 aaPredicted RBP12.77□□□□□ -0.36
LIMK1-208ENST00000538333 OR13C5Q8NGS8 318 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 ZNF501Q96CX3 271 aaPredicted RBP12.77□□□□□ -0.36
LIMK1-208ENST00000538333 SMIM19Q96E16 107 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 Q96M85 177 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.36
LIMK1-208ENST00000538333 CCDC86Q9H6F5 360 aaKnown RBP12.77□□□□□ -0.36
LIMK1-208ENST00000538333 NANSQ9NR45 359 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 ADAM30Q9UKF2 790 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 PCDHGB7Q9Y5F8 929 aa12.77□□□□□ -0.36
LIMK1-208ENST00000538333 PCNX3Q9H6A9 2034 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 TEX13CA0A0J9YWL9 993 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 A0A1B0GX78 115 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 CDC14CA4D256 554 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 A8MU76 341 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 BLOC1S5-TXNDC5H3BN57 136 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 SELENOFO60613 162 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 TSPAN2O60636 221 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 CD14P08571 375 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-208ENST00000538333 MYL9P24844 172 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 CDKN2AP42771 156 aaKnown RBP12.77□□□□□ -0.37
LIMK1-208ENST00000538333 DAB2P98082 770 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 ZNF117Q03924 483 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 IL18Q14116 193 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 NSDHLQ15738 373 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.37
LIMK1-208ENST00000538333 LYPD4Q6UWN0 246 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 TRILQ7L0X0 811 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 EXD3Q8N9H8 876 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 HLA-CQ95604 372 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 TTYH2Q9BSA4 534 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 VN1R1Q9GZP7 353 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 MMP28Q9H239 520 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 C12orf10Q9HB07 376 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 NCDNQ9UBB6 729 aa12.77□□□□□ -0.37
LIMK1-208ENST00000538333 A0A1W2PRG6 482 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms