RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 LRRC46Q96FV0 321 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 KLHL15Q96M94 604 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SLC38A2Q96QD8 506 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PKP2Q99959 881 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 RTN4RQ9BZR6 473 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 RNF32Q9H0A6 362 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 OPN3Q9H1Y3 402 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 LPAR2Q9HBW0 351 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 GPATCH2Q9NW75 528 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PDP2Q9P2J9 529 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 A0A075B6Q4 140 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 A0A1W2PPW3 197 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ADAMDEC1O15204 470 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 NADKO95544 446 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 PRKCAP17252 672 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 KLK2P20151 261 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PSMB9P28065 219 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 FMO3P31513 532 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 CSNK1A1P48729 337 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 GLO1Q04760 184 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ECH1Q13011 328 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 FHL5Q5TD97 284 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 C1orf140Q5VVS0 124 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 VASNQ6EMK4 673 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PLBD1Q6P4A8 553 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SATL1Q86VE3 508 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ZNF283Q8N7M2 679 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ZFP41Q8N8Y5 198 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ZNF511Q8NB15 262 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 CPPED1Q9BRF8 314 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 NAA11Q9BSU3 229 aaPredicted RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 HOXD1Q9GZZ0 328 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 DYNLRB1Q9NP97 96 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 MYEF2Q9P2K5 600 aaKnown RBP6.55□□□□□ -1.36
MSH6-209ENST00000538136 HRH3Q9Y5N1 445 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ADGRG4Q8IZF6 3080 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 BLACEA4D250 179 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 J3QRK9 145 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 AQP8O94778 261 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 ARAFP10398 606 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 NID1P14543 1247 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 MSX1P28360 303 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SHC1P29353 583 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 PNLIPRP2P54317 469 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 SMIM11AP58511 58 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 DHRSXQ8N5I4 330 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 APH1AQ96BI3 265 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 WFDC6Q9BQY6 131 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 COQ10BQ9H8M1 238 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 EMC7Q9NPA0 242 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 MMP25Q9NPA2 562 aa6.55□□□□□ -1.36
MSH6-209ENST00000538136 TEX13CA0A0J9YWL9 993 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 LOC100506127A0A0U1RQW1 187 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 FRG2CA6NGY1 282 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CDRT15L2A8MXV6 281 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 HLA-HP01893 362 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 LCATP04180 440 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 T-ENOLP0DO92 83 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CNR1P21554 472 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ELAVL4P26378 380 aaKnown RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 GABRA4P48169 554 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 PTDSS1P48651 473 aaKnown RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 SELENOWP63302 87 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 MED22Q15528 200 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 RNFT1Q5M7Z0 435 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 WBP2NLQ6ICG8 309 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ULK3Q6PHR2 472 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 AHSA2Q719I0 299 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 FCRLAQ7L513 359 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 LHFPL3Q86UP9 236 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 MISPQ8IVT2 679 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CARFQ8N187 725 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 OR2L13Q8N349 312 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 DACT3Q96B18 629 aaPredicted RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 TRNT1Q96Q11 434 aaKnown RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 ZNF347Q96SE7 839 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 NMNAT3Q96T66 252 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 NEK6Q9HC98 313 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 SLC35A3Q9Y2D2 325 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CCL27Q9Y4X3 112 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ASPDHA6ND91 283 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 RENP00797 406 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TMIGD3P0DMS9 266 aaPredicted RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 CALCBP10092 127 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 GGT2P36268 569 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 GIPRP48546 466 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 RHDQ02161 417 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 FAM27E3Q08E93 113 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CAMK2BQ13554 666 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 MEP1BQ16820 701 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 TNFAIP8L3Q5GJ75 292 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 DTX1Q86Y01 620 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ALDH16A1Q8IZ83 802 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 NR4A3Q92570 626 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 IMMP1LQ96LU5 166 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 ADAD1Q96M93 576 aaKnown RBP6.54□□□□□ -1.36
MSH6-209ENST00000538136 COPS4Q9BT78 406 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 CES1P1Q9UKY3 287 aa6.54□□□□□ -1.36
MSH6-209ENST00000538136 PROCRQ9UNN8 238 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms