RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 S100PBPQ96BU1 408 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 ULK4Q96C45 1275 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 COPS8Q99627 209 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 FICDQ9BVA6 458 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 PROK2Q9HC23 129 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 HACD3Q9P035 362 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 ZDHHC2Q9UIJ5 367 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 POU2F3Q9UKI9 436 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 GUCA1BQ9UMX6 200 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 MGAT4BQ9UQ53 548 aa5.44□□□□□ -1.54
CCDC60-203ENST00000536742 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC60-203ENST00000536742 ABCA13Q86UQ4 5058 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 LOC100509620A0A075B734 347 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 A0A087X0T9 212 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 IGKV3D-11A0A0A0MRZ8 115 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 A0A0G2JPF8 293 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 BTNL10A8MVZ5 291 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 HNRNPCL2B2RXH8 293 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 HNRNPCL3B7ZW38 293 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 ABCD4O14678 606 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 P2RX6O15547 441 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 MITFO75030 526 aaPredicted RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 RDH16O75452 317 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 ERLIN1O75477 346 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 REM1O75628 298 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SRP72O76094 671 aaKnown RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 TPPPO94811 219 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 NDUFA7O95182 113 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SNX4O95219 450 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 HLA-DQB2P05538 268 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SNRNP70P08621 437 aaKnown RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 FAM228BP0C875 321 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 PNMA6AP0CW24 399 aaPredicted RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 HNRNPCL4P0DMR1 293 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 PSMB5P28074 263 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SLC1A1P43005 524 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 MSH2P43246 934 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 GAS1P54826 345 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SKP1P63208 163 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 ZP4Q12836 540 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 DOC2AQ14183 400 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 IRF3Q14653 427 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SLC9A3R2Q15599 337 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 TAB1Q15750 504 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 TUBA1AQ71U36 451 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SSX8Q7RTT4 187 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 GALNT5Q7Z7M9 940 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 TMEM139Q8IV31 216 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 PSTKQ8IV42 348 aaKnown RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 MCOLN2Q8IZK6 566 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 TAGAPQ8N103 731 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 UBL4BQ8N7F7 174 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 OR8K3Q8NH51 312 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 KIF18AQ8NI77 898 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 HMGCLL1Q8TB92 370 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 SAT2Q96F10 170 aaPredicted RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 RSRC1Q96IZ7 334 aaKnown RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 IL17FQ96PD4 163 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 NEURL2Q9BR09 285 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 MRPS30Q9NP92 439 aaKnown RBP5.43□□□□□ -1.54
CCDC60-203ENST00000536742 LZTFL1Q9NQ48 299 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 CRLS1Q9UJA2 301 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 C15orf41Q9Y2V0 281 aa5.43□□□□□ -1.54
CCDC60-203ENST00000536742 A0A0G2JMP0 313 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 A0A0X1KG70 313 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 MACROD2A1Z1Q3 448 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CTAGE9A4FU28 777 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 SIGLEC16A6NMB1 481 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CLGNO14967 610 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CCNCP24863 283 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CASQ1P31415 396 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 SSR1P43307 286 aaKnown RBP5.42□□□□□ -1.54
CCDC60-203ENST00000536742 TERF1P54274 439 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 MFAP4P55083 255 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GNG11P61952 73 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 BTG2P78543 158 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GAGE2BQ13066 116 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GRB7Q14451 532 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 P2RY6Q15077 328 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 HADHQ16836 314 aaKnown RBP5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GAGE2EQ4V326 116 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 TMEM35AQ53FP2 167 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GAGE2AQ6NT46 116 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 NIPAL1Q6NVV3 410 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CCDC190Q86UF4 302 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 MUC20Q8N307 709 aaPredicted RBP5.42□□□□□ -1.54
CCDC60-203ENST00000536742 CAMKVQ8NCB2 501 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 FAM83FQ8NEG4 500 aaPredicted RBP5.42□□□□□ -1.54
CCDC60-203ENST00000536742 Q8NFD4 153 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 OR4M2Q8NGB6 313 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 OR6K3Q8NGY3 331 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 ATL1Q8WXF7 558 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 SPACA9Q96E40 222 aaPredicted RBP5.42□□□□□ -1.54
CCDC60-203ENST00000536742 DESI2Q9BSY9 194 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 RNF122Q9H9V4 155 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 LPAR2Q9HBW0 351 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 HOMER3Q9NSC5 361 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 MALT1Q9UDY8 824 aa5.42□□□□□ -1.54
CCDC60-203ENST00000536742 GAGE2DQ9UEU5 116 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms