RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 STK35Q8TDR2 534 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 NAA11Q9BSU3 229 aaPredicted RBP11.64□□□□□ -0.55
PRKDC-206ENST00000536429 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 MRGBPQ9NV56 204 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF226Q9NYT6 803 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 EMC3Q9P0I2 261 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 RPS6KB2Q9UBS0 482 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 TESQ9UGI8 421 aaKnown RBP11.64□□□□□ -0.55
PRKDC-206ENST00000536429 PRDM4Q9UKN5 801 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 FLVCR1Q9Y5Y0 555 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 ROS1P08922 2347 aa11.64□□□□□ -0.55
PRKDC-206ENST00000536429 A0A0B4J2E0 115 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 A0A1B0GX12 115 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ELOA3DA6NLF2 546 aaPredicted RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 AIM2O14862 343 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 THY1P04216 161 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 TNFRSF1BP20333 461 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 IL32P24001 234 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 CDH12P55289 794 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ELOA3BQ3SY89 546 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ALG10BQ5I7T1 473 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 CASP12Q6UXS9 341 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 CCDC80Q76M96 950 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 PATL1Q86TB9 770 aaKnown RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 KDM8Q8N371 416 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 PCYOX1LQ8NBM8 494 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ELOA3Q8NG57 546 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 OR9K2Q8NGE7 335 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 RP9Q8TA86 221 aaKnown RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 VANGL1Q8TAA9 524 aaPredicted RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 KISS1RQ969F8 398 aaPredicted RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ZNF385AQ96PM9 386 aaKnown RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 SH3GL1Q99961 368 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 TAPBPLQ9BX59 468 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 MYLK2Q9H1R3 596 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 C12orf10Q9HB07 376 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 CCM2LQ9NUG4 571 aaPredicted RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
PRKDC-206ENST00000536429 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 MAP1AP78559 2803 aaPredicted RBP11.63□□□□□ -0.55
PRKDC-206ENST00000536429 HIVEP1P15822 2718 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-206ENST00000536429 GPR171O14626 319 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 SNX3O60493 162 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 CCDC22O60826 627 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 LYPD3O95274 346 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 AHSA1O95433 338 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 NPPAP01160 153 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 PNMTP11086 282 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 PPP3CBP16298 524 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 COX5AP20674 150 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 CBLP22681 906 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 NCALDP61601 193 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 GNGT1P63211 74 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 LTBQ06643 244 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 ITGADQ13349 1161 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 P2RY6Q15077 328 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 TAB1Q15750 504 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 SEZ6L2Q6UXD5 910 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 PAMR1Q6UXH9 720 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 WDR88Q6ZMY6 472 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 BHLHA15Q7RTS1 189 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-206ENST00000536429 GPAT4Q86UL3 456 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 SLC30A8Q8IWU4 369 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 BHLHE22Q8NFJ8 381 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-206ENST00000536429 STEAP2Q8NFT2 490 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 MFSD8Q8NHS3 518 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 RNF217Q8TC41 542 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 DNAJA4Q8WW22 397 aaPredicted RBP11.62□□□□□ -0.55
PRKDC-206ENST00000536429 SLC38A4Q969I6 547 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 APH1AQ96BI3 265 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 MCHR1Q99705 422 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 TMEM27Q9HBJ8 222 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 GID8Q9NWU2 228 aa11.62□□□□□ -0.55
PRKDC-206ENST00000536429 F8P00451 2351 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 A0A087WUJ7 227 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 GMNCA6NCL1 334 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 CPSF4LA6NMK7 179 aaKnown RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 ENO4A6NNW6 628 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 FAM220BPB1ANY3 271 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 LRRN3E7EW58 273 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 FZD7O75084 574 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 MRPL33O75394 65 aaKnown RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 GOSR1O95249 250 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 ATE1O95260 518 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 PLAUP00749 431 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 C8BP07358 591 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 LGALS3BPQ08380 585 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 FAPQ12884 760 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 ENTPD8Q5MY95 495 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 INTS11Q5TA45 600 aaKnown RBP11.61□□□□□ -0.55
PRKDC-206ENST00000536429 TSPO2Q5TGU0 170 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 C9orf135Q5VTT2 229 aa11.61□□□□□ -0.55
PRKDC-206ENST00000536429 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms