RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 SOX14O95416 240 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 PTHP01270 115 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 IL7P13232 177 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 HTR1FP30939 366 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CSTF2P33240 577 aaKnown RBP eCLIP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 LIPAP38571 399 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CBX5P45973 191 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SUMO3P55854 103 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SSX1Q16384 188 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF239Q16600 458 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 TMEM44Q2T9K0 475 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 TOR2AQ5JU69 321 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 VASNQ6EMK4 673 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 WBP2NLQ6ICG8 309 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CD200R1LQ6Q8B3 271 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF730Q6ZMV8 503 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 RAB43Q86YS6 212 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 OR8H2Q8N162 312 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 IQCF1Q8N6M8 205 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF540Q8NDQ6 660 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 DYNC2LI1Q8TCX1 351 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 LGALS12Q96DT0 336 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 Q96MT0 163 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 GON7Q9BXV9 100 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 GHITMQ9H3K2 345 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 RASSF1Q9NS23 344 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NPAP1Q9NZP6 1156 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 HIF3AQ9Y2N7 669 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 MRPS7Q9Y2R9 242 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 HRH3Q9Y5N1 445 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 KIF26BQ2KJY2 2108 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 A0A0X1KG70 313 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 FAM25EA8MYX2 175 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 IMPA2O14732 288 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 TSC22D2O75157 780 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 BGLAPP02818 100 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SCG5P05408 212 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 APEHP13798 732 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SLC6A8P48029 635 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SLC26A5P58743 744 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 DAB2P98082 770 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 INSM1Q01101 510 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CD83Q01151 205 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NTRK2Q16620 822 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF791Q3KP31 576 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF404Q494X3 552 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 YIF1BQ5BJH7 314 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SMARCD3Q6STE5 483 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CPEB2Q7Z5Q1 589 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 MISPQ8IVT2 679 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 FADS6Q8N9I5 356 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF527Q8NB42 609 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 BPIFA2Q96DR5 249 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 MFRPQ9BY79 579 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 OR52D1Q9H346 318 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 PCDHGA1Q9Y5H4 931 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 A0A0G2JMP0 313 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ARPC3O15145 178 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF264O43296 627 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CSO75390 466 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SLC34A2O95436 690 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CFIP05156 583 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 STSP08842 583 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 DDOSTP39656 456 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 IL1RL1Q01638 556 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 LTBQ06643 244 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ST3GAL4Q11206 333 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NSDHLQ15738 373 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 SPANXN2Q5MJ10 180 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 C1orf189Q5VU69 101 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NIPAL3Q6P499 406 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CORO6Q6QEF8 472 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 M1APQ8TC57 530 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 GPR119Q8TDV5 335 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ZPBPQ9BS86 351 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CNPPD1Q9BV87 410 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 ARRDC1-AS1Q9H2J1 176 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 MMP25Q9NPA2 562 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 KRCC1Q9NPI7 259 aaPredicted RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NRIP3Q9NQ35 241 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 PNO1Q9NRX1 252 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CLN6Q9NWW5 311 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 NDUFB11Q9NX14 153 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 MKL2Q9ULH7 1088 aa7.28□□□□□ -1.24
COL21A1-212ENST00000535941 RPL36Q9Y3U8 105 aaKnown RBP7.28□□□□□ -1.24
COL21A1-212ENST00000535941 CPED1A4D0V7 1026 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 GDF9O60383 454 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 CDC40O60508 579 aaKnown RBP eCLIP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 LRP3O75074 770 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 LDOC1O95751 146 aaPredicted RBP7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PNMTP11086 282 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 GPR4P46093 362 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 PGDP52209 483 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 ZMYND11Q15326 602 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 ZNF74Q16587 644 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 NDUFAF6Q330K2 333 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 TCEAL6Q6IPX3 200 aa7.27□□□□□ -1.25
COL21A1-212ENST00000535941 CBLN3Q6UW01 205 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms