RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 NTHL1P78549 312 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 GALK2Q01415 458 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 FUT5Q11128 374 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 PDIA5Q14554 519 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SGCAQ16586 387 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 TIGITQ495A1 244 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 DEFB134Q4QY38 66 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 FAM78AQ5JUQ0 283 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZFP1Q6P2D0 407 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 FAM199XQ6PEV8 388 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SHQ1Q6PI26 577 aaKnown RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CBLN3Q6UW01 205 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CASP12Q6UXS9 341 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 HSDL2Q6YN16 418 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 KDM7AQ6ZMT4 941 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 GET4Q7L5D6 327 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 VSTM4Q8IW00 320 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 RDH10Q8IZV5 341 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 LRRC17Q8N6Y2 441 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 ST20-AS1Q8NBB2 130 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 STKLD1Q8NE28 680 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 IPMKQ8NFU5 416 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR5M1Q8NGP8 315 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR1N2Q8NGR9 330 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR9A2Q8NGT5 310 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 OR56B4Q8NH76 319 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CMTM2Q8TAZ6 248 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CNIH3Q8TBE1 160 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 DEPDC1BQ8WUY9 529 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 BCL2L2Q92843 193 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 MR1Q95460 341 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 NEURL3Q96EH8 262 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 AURKBQ96GD4 344 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 TMEM246Q9BRR3 403 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 ZSCAN5AQ9BUG6 496 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CHAC1Q9BUX1 264 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 NAT10Q9H0A0 1025 aaKnown RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 DEFB127Q9H1M4 99 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 DHX35Q9H5Z1 703 aaKnown RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 RPAP3Q9H6T3 665 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SUDS3Q9H7L9 328 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 AKIRIN1Q9H9L7 192 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 GPN2Q9H9Y4 310 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 FOLH1BQ9HBA9 442 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 NEK6Q9HC98 313 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SLCO1B3Q9NPD5 702 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 TRPV5Q9NQA5 729 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 FBXO6Q9NRD1 293 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 CTPS2Q9NRF8 586 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 HOMER3Q9NSC5 361 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SLC2A8Q9NY64 477 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 SEC16AO15027 2179 aa-0.01□□□□□ -2.41
COPB1-212ENST00000534771 NUP214P35658 2090 aaPredicted RBP-0.01□□□□□ -2.41
COPB1-212ENST00000534771 IGKV2-29A2NJV5 120 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 ZNF320A2RRD8 509 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 C5orf63A6NC05 138 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAM74A7A6NL05 159 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 C4orf51C9J302 202 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 E9PMD0 336 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SGK494L7N484 410 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 POLR1CO15160 346 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 IGHDP01880 384 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 HLA-DQA1P01909 254 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 ANGP03950 147 aaKnown RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 APOA4P06727 396 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SMIM10L1P0DMW3 83 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 HRES1P13985 223 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 AREGP15514 252 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CTNNB1P35222 781 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CXCL12P48061 93 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CYB561P49447 251 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 KRTAP10-4P60372 401 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 OSTNP61366 133 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 RIPPLY1Q0D2K3 151 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 ERCC8Q13216 396 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 LAGE3Q14657 143 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 SS18Q15532 418 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 CARTPTQ16568 116 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 MEP1BQ16820 701 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 KRTAP21-1Q3LI58 79 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 TTLL9Q3SXZ7 439 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FUT11Q495W5 492 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAM74A3Q4VXF1 159 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 IFI44LQ53G44 452 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 HES5Q5TA89 166 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 AP1ARQ63HQ0 302 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 LCN12Q6JVE5 192 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAHD2BQ6P2I3 314 aaPredicted RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 NEK5Q6P3R8 708 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 TMEM184AQ6ZMB5 413 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 TMEM136Q6ZRR5 245 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 FAM47EQ6ZV65 393 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 LANCL3Q6ZV70 420 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 APTXQ7Z2E3 356 aaKnown RBP-0.02□□□□□ -2.41
COPB1-212ENST00000534771 NT5DC3Q86UY8 548 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 THNSL1Q8IYQ7 743 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 LRRC43Q8N309 656 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 C15orf54Q8N8G6 183 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 TMEM105Q8N8V8 129 aa-0.02□□□□□ -2.41
COPB1-212ENST00000534771 OR13G1Q8NGZ3 307 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms