RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	RPL38	P63173	70 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	LOXL1	Q08397	574 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	RASGEF1B	Q0VAM2	473 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	C1QTNF12	Q5T7M4	302 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	C11orf71	Q6IPW1	123 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	GALNT5	Q7Z7M9	940 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	DEFB107A	Q8IZN7	70 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF433	Q8N7K0	673 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	PCYOX1L	Q8NBM8	494 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	ADAMTS15	Q8TE58	950 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	JADE3	Q92613	823 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	MOAP1	Q96BY2	351 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	COQ8B	Q96D53	544 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	ADAD1	Q96M93	576 aa	Known RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	TNFRSF13C	Q96RJ3	184 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	C1orf50	Q9BV19	199 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	SDR39U1	Q9NRG7	319 aa	Predicted RBP	10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	PRSS50	Q9UI38	385 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	CDC42EP3	Q9UKI2	254 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	NDUFAF1	Q9Y375	327 aa		10.18	□□□□□ -0.78
CTNND1-238	ENST00000534647	CR1	P17927	2039 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	FREM1	Q5H8C1	2179 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	ABCD4	O14678	606 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	MRAS	O14807	208 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC22A3	O75751	556 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	LYZL6	O75951	148 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	LAMP1	P11279	417 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	BMP2	P12643	396 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	IGHV1-2	P23083	117 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	PTAFR	P25105	342 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	TTK	P33981	857 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	HPCAL1	P37235	193 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	C21orf58	P58505	322 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	VLDLR	P98155	873 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	CBFB	Q13951	182 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	QPRT	Q15274	297 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF141	Q15928	474 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	C6orf52	Q5T4I8	152 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	IL23R	Q5VWK5	629 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	FBXW9	Q5XUX1	488 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	REP15	Q6BDI9	236 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	C3orf33	Q6P1S2	294 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMEM108	Q6UXF1	575 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMPPE	Q6ZT21	453 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	OR7A2P	Q8NGA2	310 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	CLHC1	Q8NHS4	586 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	SFXN5	Q8TD22	340 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	TSPEAR	Q8WU66	669 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	OIT3	Q8WWZ8	545 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	ST8SIA1	Q92185	356 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	UTP4	Q969X6	686 aa	Known RBP	10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	OTUB1	Q96FW1	271 aa	Predicted RBP	10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	SDF2	Q99470	211 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	DHRS9	Q9BPW9	319 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	LAT2	Q9GZY6	243 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	CBLN4	Q9NTU7	201 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATAD3A	Q9NVI7	634 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	NPAP1	Q9NZP6	1156 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	PRPF19	Q9UMS4	504 aa	Known RBP	10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	FAF1	Q9UNN5	650 aa	Predicted RBP	10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	GPR45	Q9Y5Y3	372 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	KCNE3	Q9Y6H6	103 aa		10.17	□□□□□ -0.78
CTNND1-238	ENST00000534647	IGHV4-30-2	A0A087WSY4	118 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	IGHV3-15	A0A0B4J1V0	119 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	FAM234B	A2RU67	622 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SERINC4	A6NH21	518 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	CCDC154	A6NI56	674 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	DUXA	A6NLW8	204 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647		H7C417	338 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	RGS13	O14921	159 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	CFLAR	O15519	480 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SSX4	O60224	188 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	GPRIN2	O60269	458 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	H6PD	O95479	791 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	GUSB	P08236	651 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	UBL4A	P11441	157 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC25A16	P16260	332 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	EFNA1	P20827	205 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	EDNRA	P25101	427 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	FKBP2	P26885	142 aa	Known RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	DIO1	P49895	249 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	POLR2J	P52435	117 aa	Known RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	CDH11	P55287	796 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	CSNK2A1	P68400	391 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SKP2	Q13309	424 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	RIPK1	Q13546	671 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ODF1	Q14990	250 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	STK11	Q15831	433 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	TMEM249	Q2WGJ8	235 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	TIGD2	Q4W5G0	525 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF544	Q6NX49	715 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	BHLHB9	Q6PI77	547 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	RIMKLA	Q8IXN7	391 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF100	Q8IYN0	542 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	PGAM4	Q8N0Y7	254 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ATP6V1C2	Q8NEY4	427 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	MUS81	Q96NY9	551 aa		10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	ZNF300	Q96RE9	604 aa	Predicted RBP	10.16	□□□□□ -0.78
CTNND1-238	ENST00000534647	PRPF18	Q99633	342 aa	Known RBP	10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms